DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4408 and ccpp-6

DIOPT Version :9

Sequence 1:NP_651141.2 Gene:CG4408 / 42762 FlyBaseID:FBgn0039073 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_495012.2 Gene:ccpp-6 / 184043 WormBaseID:WBGene00017136 Length:459 Species:Caenorhabditis elegans


Alignment Length:393 Identity:79/393 - (20%)
Similarity:152/393 - (38%) Gaps:86/393 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VIQESKASSFCTKADQCALDE-EIKTAADSVQARYDHTRIYQVELASEEHVRLFQALEQASDSCS 111
            |.:.|..|....:.|:.:..| ::....|::..:|.....::.:.|||....:|..:..:.....
 Worm    20 VFEASFESGNLGRVDKVSCSEYDLFIRPDTLNNKYRVWFYFECKNASENQRAIFNIVNFSKQRTL 84

  Fly   112 F-MGHARQPGQKLTIMVTGAKVADFDDLVHSYNVTHRVLNYNFQALIDANYLEVAPEDTKPEEFD 175
            | ||.| .|..|.....:.|::..    .|.|  .:|...:|.:.::...::..:|:   |.:|.
 Worm    85 FEMGIA-APVVKSNAQNSWARIPS----RHIY--YYRSSQHNDRWILSFAFIFESPD---PVQFA 139

  Fly   176 WKRYHPLESINAWLKKL-AETHP---EVLLVELGVSAQGRPILGVQI-----AFDNENRTTVFVE 231
            :...:....:..||.:| :..:|   ..|||:   :.|.|.:..:.|     .|.. ::..:|:.
 Worm   140 YCIPYTYGQMQIWLNELESRKYPFFHRDLLVQ---TVQKRRVDLITIDATPDTFQG-SKKMIFLT 200

  Fly   232 SGIHAREWIAPATATYIIDQLVNSKDSAVQALARSQRWYIFPTVNPDG-----YQYTFKG---DR 288
            :.:|..|..:......||:.|| |||...|.|.:...:.|.|.:||||     |:.:..|   :|
 Worm   201 ARVHPGESPSSHVMHGIIEFLV-SKDDRAQKLRKVYCFKIIPMLNPDGVFLGNYRCSLMGHDLNR 264

  Fly   289 MWRKNRALFGICRGVDLNRNFPFHW---NVTGASGDPCRYDYSGPSAASEVETQRMIEFIRHRVE 350
            |||.                 |..|   ::........:|| :.|.|.:.:              
 Worm   265 MWRT-----------------PSDWAHPSIYAVKNLLTQYD-NNPQAQTVI-------------- 297

  Fly   351 SERIRTFISLHSYSQM-IMFPYGH----SAERVDNY------HDLTDIGKLAANKIKDVSGRIYK 404
                  ::.||::||. ..|.||:    :.|....:      |.|.|:.:..:.:....:..:.|
 Worm   298 ------YVDLHAHSQKPNCFLYGNVNMSAVEEKSTFRQLWLPHLLADLSEDYSLEFTQFNTDVEK 356

  Fly   405 SGS 407
            :|:
 Worm   357 AGT 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4408NP_651141.2 Propep_M14 88..159 CDD:280416 15/71 (21%)
M14_CP_A-B_like 179..472 CDD:199844 54/260 (21%)
ccpp-6NP_495012.2 M14_AGBL4_like 153..418 CDD:133118 53/250 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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