DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS3 and AT5G35530

DIOPT Version :9

Sequence 1:NP_001287481.1 Gene:RpS3 / 42761 FlyBaseID:FBgn0002622 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_198403.1 Gene:AT5G35530 / 833518 AraportID:AT5G35530 Length:248 Species:Arabidopsis thaliana


Alignment Length:218 Identity:165/218 - (75%)
Similarity:184/218 - (84%) Gaps:0/218 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIREL 71
            ||||||||:||:|.|||||.|||||||||||||||||||.||||||.||:||.||||||||||||
plant     5 ISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69

  Fly    72 TAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGC 136
            |::|||||.|....:||||||||.||||||||||||||||.||||||||||||||::||||||||
plant    70 TSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGC 134

  Fly   137 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIG 201
            ||:||||||..|||||||.||.|:.||.|..:|::.|.|||||||||||:|||:||.:|||.|.|
plant   135 EVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKVKIMLDWDPKGKQG 199

  Fly   202 PKKPLPDNVSVVEPKEEKIYETP 224
            |..||||.|.:..|||:.:|..|
plant   200 PMTPLPDVVIIHTPKEDDVYIAP 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS3NP_001287481.1 PTZ00084 6..222 CDD:240260 163/214 (76%)
AT5G35530NP_198403.1 PTZ00084 3..219 CDD:240260 163/213 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 137 1.000 Domainoid score I1582
eggNOG 1 0.900 - - E1_COG0092
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H779
Inparanoid 1 1.050 331 1.000 Inparanoid score I675
OMA 1 1.010 - - QHG60603
OrthoDB 1 1.010 - - D1135751at2759
OrthoFinder 1 1.000 - - FOG0001904
OrthoInspector 1 1.000 - - otm3315
orthoMCL 1 0.900 - - OOG6_100514
Panther 1 1.100 - - O PTHR11760
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2144
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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