DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS3 and RPS3

DIOPT Version :9

Sequence 1:NP_001287481.1 Gene:RpS3 / 42761 FlyBaseID:FBgn0002622 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001247435.1 Gene:RPS3 / 6188 HGNCID:10420 Length:259 Species:Homo sapiens


Alignment Length:246 Identity:193/246 - (78%)
Similarity:208/246 - (84%) Gaps:16/246 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIREL 71
            ||||||||:||||||||||||||||||||||||||||||:||||||:||:||.||||||||||||
Human     5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

  Fly    72 TAMVQKRFNFETGRIE----------------LYAEKVAARGLCAIAQAESLRYKLTGGLAVRRA 120
            ||:|||||.|..|.:|                |||||||.||||||||||||||||.||||||||
Human    70 TAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRA 134

  Fly   121 CYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLG 185
            ||||||:||||||||||||||||||||||||||||||||||||||.|.||:||.|||||||||||
Human   135 CYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLG 199

  Fly   186 IKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKP 236
            ||||:|||:||..||||||||||:||:||||:|.:..||.:|.|...|..|
Human   200 IKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPP 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS3NP_001287481.1 PTZ00084 6..222 CDD:240260 187/230 (81%)
RPS3NP_001247435.1 PTZ00084 4..232 CDD:240260 186/226 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155358
Domainoid 1 1.000 155 1.000 Domainoid score I4242
eggNOG 1 0.900 - - E1_COG0092
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H779
Inparanoid 1 1.050 381 1.000 Inparanoid score I2062
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60603
OrthoDB 1 1.010 - - D1135751at2759
OrthoFinder 1 1.000 - - FOG0001904
OrthoInspector 1 1.000 - - oto91312
orthoMCL 1 0.900 - - OOG6_100514
Panther 1 1.100 - - LDO PTHR11760
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1246
SonicParanoid 1 1.000 - - X2144
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.