DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS3 and Rps3

DIOPT Version :9

Sequence 1:NP_001287481.1 Gene:RpS3 / 42761 FlyBaseID:FBgn0002622 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_036182.1 Gene:Rps3 / 27050 MGIID:1350917 Length:243 Species:Mus musculus


Alignment Length:230 Identity:193/230 - (83%)
Similarity:208/230 - (90%) Gaps:0/230 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIREL 71
            ||||||||:||||||||||||||||||||||||||||||:||||||:||:||.||||||||||||
Mouse     5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 69

  Fly    72 TAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGC 136
            ||:|||||.|..|.:||||||||.||||||||||||||||.||||||||||||||:|||||||||
Mouse    70 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134

  Fly   137 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIG 201
            |||||||||||||||||||||||||||||.|.||:||.|||||||||||||||:|||:||..|||
Mouse   135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIG 199

  Fly   202 PKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKP 236
            |||||||:||:||||:|.:..||.:|.|...|..|
Mouse   200 PKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPP 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS3NP_001287481.1 PTZ00084 6..222 CDD:240260 187/214 (87%)
Rps3NP_036182.1 PTZ00084 4..216 CDD:240260 186/210 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..243 20/35 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845822
Domainoid 1 1.000 155 1.000 Domainoid score I4236
eggNOG 1 0.900 - - E1_COG0092
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H779
Inparanoid 1 1.050 382 1.000 Inparanoid score I2036
Isobase 1 0.950 - 0.861654 Normalized mean entropy S130
OMA 1 1.010 - - QHG60603
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001904
OrthoInspector 1 1.000 - - oto94890
orthoMCL 1 0.900 - - OOG6_100514
Panther 1 1.100 - - LDO PTHR11760
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1246
SonicParanoid 1 1.000 - - X2144
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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