DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RpS3 and rps-3

DIOPT Version :9

Sequence 1:	NP_001287481.1	Gene:	RpS3 / 42761	FlyBaseID:	FBgn0002622	Length:	246	Species:	Drosophila melanogaster
Sequence 2:	NP_498349.1	Gene:	rps-3 / 175879	WormBaseID:	WBGene00004472	Length:	247	Species:	Caenorhabditis elegans

Alignment Length:	229	Identity:	164/229 - (71%)
Similarity:	197/229 - (86%)	Gaps:	0/229 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MNANLPISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKG 65
            |.||..::||:|.|..||||||||.||.:|||||||||||||.||:|.|:|||||:||.||||:|
Worm     1 MAANQNVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERG 65

  Fly    66 RRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIME 130
            |||:|||::|||||.||.|.:|||||||:.|||||:||.|||||||.||||||||||||||:|||
Worm    66 RRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIME 130

  Fly   131 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYD 195
            |||:|.||:|||||||||||:||||||||||||.|.|||::.|.|||.|||||:|||||:|||||
Worm   131 SGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYD 195

  Fly   196 PKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229
            |:.:.||:..|||:|.:|||:||.:.:.|.:::|
Worm   196 PRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQHK 229

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpS3	NP_001287481.1	PTZ00084	6..222	CDD:240260	159/215 (74%)
rps-3	NP_498349.1	PTZ00084	5..218	CDD:240260	157/212 (74%)
		40S_S3_KH	17..97	CDD:239096	60/79 (76%)
		Ribosomal_S3_C	107..188	CDD:278613	66/80 (83%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	143	1.000	Domainoid score	I2895
eggNOG	1	0.900	-	-		E1_COG0092
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H779
Inparanoid	1	1.050	339	1.000	Inparanoid score	I1402
Isobase	1	0.950	-	0.861654	Normalized mean entropy	S130
OMA	1	1.010	-	-		QHG60603
OrthoDB	1	1.010	-	-		D1135751at2759
OrthoFinder	1	1.000	-	-		FOG0001904
OrthoInspector	1	1.000	-	-		oto17487
orthoMCL	1	0.900	-	-		OOG6_100514
Panther	1	1.100	-	-	LDO	PTHR11760
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1246
SonicParanoid	1	1.000	-	-		X2144
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	16	15.860