DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynCF6 and Atp5pf

DIOPT Version :10

Sequence 1:NP_477194.1 Gene:ATPsynCF6 / 42759 FlyBaseID:FBgn0016119 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_446054.1 Gene:Atp5pf / 94271 RGDID:621376 Length:108 Species:Rattus norvegicus


Alignment Length:106 Identity:46/106 - (43%)
Similarity:63/106 - (59%) Gaps:8/106 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LSQSLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKS-AGGKLVDSNPDIERE 65
            ||..|.|.:.|   ..|||.|:.|.|.||..||:|:|||||:||||.|. |.|..||:.|:.::|
  Rat     9 LSSVLRSAVSV---HLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQE 70

  Fly    66 LKTELDRVAKQFGSDGKTDMLKFPEFQFPDVKVDPITQAPQ 106
            :..||.::.:.:   ||.:|.|||.|.|.|.|.: :...||
  Rat    71 VDRELFKLKQMY---GKGEMDKFPTFNFEDPKFE-VLDKPQ 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCF6NP_477194.1 ATP-synt_F6 11..94 CDD:461669 37/83 (45%)
Atp5pfNP_446054.1 ATP-synt_F6 1..96 CDD:461669 41/92 (45%)

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