Sequence 1: | NP_524462.2 | Gene: | DNApol-epsilon255 / 42758 | FlyBaseID: | FBgn0264326 | Length: | 2236 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_014297.3 | Gene: | POL1 / 855621 | SGDID: | S000005046 | Length: | 1468 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1538 | Identity: | 273/1538 - (17%) |
---|---|---|---|
Similarity: | 462/1538 - (30%) | Gaps: | 559/1538 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 SSKGKVLQNTGKF-VSENRTEGDDF-------------FNEAGYRQSR----------------- 37
Fly 38 -------------ENDKIDSKYGFDRVKDSQER-----------TGYLINMHSNEVL----DEDR 74
Fly 75 RLIAALDLFFIQMDG--SRFKCTVAYQPYLLI----------RPEDNMHLEVARFLGRKYSGQIS 127
Fly 128 GLEHITKEDLD------LPNHLSGLQQQYIKLSFLN--QTAMTKVRRELMSAVKRNQERQKSNTY 184
Fly 185 YMQMLAT-SLAQSSAGSEDATLGKRQQDYMDCIVDIREHDVPYHVRVSIDLRIFCGQWYNIRCRS 248
Fly 249 GVELPTITCRPDILDRPEPVVLAFDIETTKLPLKFPDAQTDQVMMISYMIDGQGYLITNREIISS 313
Fly 314 NVDDFEYTPKPEFEGNFIVFNEENEMQLLQRFFDHIMEVRPHIIVTYNGDFFDWPFVETRAAVYD 378
Fly 379 LDMKQEIGFSKLRDGNYLSRPAIHMDCLC----WVKRDSYLPVG-SQGLKAVAKAKLRYDPVELD 438
Fly 439 PEDMCRMAVEQPQVLANYSVSDAVATYYLYMKYVHPFIFALNTIIPMEPDEILRKGSGTLCETLL 503
Fly 504 MVEAYHAQIVYPNKHQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADI--PCRFRLDPAMVK 566
Fly 567 QLQEQVDAVLRHAIEVEEGI----------------PLEKVLNLDEVRQEIV-------QGLQGL 608
Fly 609 HDIPNRLE-----------QPVIYHLDVGAMY-----------------------------PNII 633
Fly 634 LTNRLQ----------------PS-------------------------AMVSDLDCAA---CDF 654
Fly 655 -NKPG-----------------VRCKRSMDWLWRGEMLPASRNEFQ------------------- 682
Fly 683 --RIQQQLETEKFPPLFPG------GPQRA-------FHELSKE---------DQAAYEKKRLTD 723
Fly 724 YCRKAYKKTKLTKLE-----------TRTSTICQKENSFYVDTVRAFR------DRRYE-YKGLT 770
Fly 771 KVAKASVNAAVASGDAA-------EIKAAKGRE------VLYDSLQLAHKCILNSFYGYVMRRGA 822
Fly 823 RWHSMPMAGIVCLTGSNIITKAREIIERVGRPLEL-DTDGIWCILPGSFPQEFTIHTSHEKKKKI 886
Fly 887 NISYPNAVLNTMVKDHFTNDQYHELRKDKENNLPKYDIRDENSIFFEVDGPYLAMVLPAAKEEGK 951
Fly 952 KLKKRYAVF--NFD-----GTLAELKGFEVKRRGELQLIKNFQSSVFEAFLAGSTLEECYASVAK 1009
Fly 1010 VADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEY-GAQKSTSISTAKRLAEFLGEQMVKDA 1073
Fly 1074 GLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRR-WLKDNTMGDADIRDVLDWNYYIER 1137
Fly 1138 LGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEKNDVLKQRRINEMFTSRPKP-------- 1194
Fly 1195 ---------KPLATEEDKLADMEDLAGKDGGEGAAGCPIVTKR 1228 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
DNApol-epsilon255 | NP_524462.2 | DNA_polB_epsilon_exo | 266..469 | CDD:99822 | 29/207 (14%) |
POLBc_epsilon | 529..1154 | CDD:99918 | 153/835 (18%) | ||
DUF1744 | 1529..1930 | CDD:369900 | |||
POL1 | NP_014297.3 | pol2 | 29..1227 | CDD:273159 | 247/1438 (17%) |
zf-DNA_Pol | 1269..1463 | CDD:401082 | 8/27 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0417 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |