DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolE1 and AT1G49180

DIOPT Version :10

Sequence 1:NP_524462.2 Gene:PolE1 / 42758 FlyBaseID:FBgn0264326 Length:2236 Species:Drosophila melanogaster
Sequence 2:NP_175344.2 Gene:AT1G49180 / 841341 AraportID:AT1G49180 Length:408 Species:Arabidopsis thaliana


Alignment Length:344 Identity:69/344 - (20%)
Similarity:120/344 - (34%) Gaps:129/344 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   883 KKKINISYPNAVLNTMVKDHFTNDQ----YHELRKDKENNLPKYDIRD--ENSIFF--EVDGPYL 939
            |.|::.|..:.|  .:.|...|.::    ..:|.|...|      :||  .|.:.|  .||.|.:
plant    10 KSKLSESLTSTV--WLAKHKLTGEEAVMKCFDLSKLNRN------LRDCLNNELEFLSSVDHPNI 66

  Fly   940 AMVLPAAKEEGKKLKKRYAVFNFD----GTLAELKGFEVKRRGELQ--LIKNFQSSVFEAFLAGS 998
            ..:|..::::.      :.|...:    |||:..    ::|.|.::  :.|.|...:      |:
plant    67 IRLLHVSQDDD------FLVMVLEYCDGGTLSSY----IQRYGRVEEDIAKRFMKQI------GA 115

  Fly   999 TLEECYAS---------------------VAKVADYWL----------------------DVL-Y 1019
            .||..:.:                     |.|:||:.|                      :|| :
plant   116 GLEIIHDNHIIHRDLKPENILIDGSGDDLVLKIADFSLARKLHPGKYLETVCGSPFYMAPEVLQF 180

  Fly  1020 SRGSNLPD-----SELFELI--------SENKSMSKKLEEYGAQKSTSISTAKRLAEFLGEQMVK 1071
            .|.:...|     :.||||:        :.|..:.:.::.         |||...:..:.:||..
plant   181 QRYNEKADMWSVGAILFELLHGYPPFRGNNNVQVLRNIKS---------STALPFSRLILQQMHP 236

  Fly  1072 DAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRR-HHLRRWLKDNTMGDADIRDVLDWNYYI 1135
            |....|..::|..|        |..|.| :..|.:.| .:.|.|:||.|              :.
plant   237 DCIDVCSRLLSINP--------AATLGI-EDFPFLGRIKNSRVWVKDTT--------------FS 278

  Fly  1136 ERLGGTIQ-KIITIPAALQ 1153
            .|..||.: |:.||...||
plant   279 SRQHGTRERKVATINGRLQ 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolE1NP_524462.2 DNA_polB_epsilon_exo 266..469 CDD:99822
POLBc_epsilon 529..1154 CDD:99918 69/344 (20%)
DUF1744 1529..1930 CDD:462493
AT1G49180NP_175344.2 STKc_ATG1_ULK_like 13..261 CDD:270911 52/289 (18%)
PTZ00166 <248..>354 CDD:240301 19/73 (26%)
Blue background indicates that the domain is not in the aligned region.

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