DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNApol-epsilon255 and TIL2

DIOPT Version :9

Sequence 1:NP_524462.2 Gene:DNApol-epsilon255 / 42758 FlyBaseID:FBgn0264326 Length:2236 Species:Drosophila melanogaster
Sequence 2:NP_001325161.1 Gene:TIL2 / 817254 AraportID:AT2G27120 Length:2141 Species:Arabidopsis thaliana


Alignment Length:2269 Identity:900/2269 - (39%)
Similarity:1319/2269 - (58%) Gaps:235/2269 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DKIDSKYGFDRVKDSQERTGYLINMHSNEVLDEDR-RLIAALDLFFIQMDGSRFKCTVAYQPYLL 103
            |::::|.||......:.|.|:|:...|:...|.|. :..:.:||||:..|||.||....::|||.
plant    19 DELETKLGFGLFSQGETRLGWLLTFASSSWEDADTGKTFSCVDLFFVTQDGSSFKTKYKFRPYLY 83

  Fly   104 IRPEDNMHLEVARFLGRKYSGQISGLEHITKEDLDLPNHLSGLQQQYIKLSFLNQTAMTKVRREL 168
            ...:|||.|||..:|.|:|..|::.::.:.||||.|.|||||||::|:|:||.....:.:|:|:|
plant    84 AATKDNMELEVEAYLRRRYERQVADIQIVHKEDLYLKNHLSGLQKKYLKVSFDTVQQLVEVKRDL 148

  Fly   169 MSAVKRNQERQKSNTYYMQMLATSLAQSSAGSEDATLGKRQ---QDYMDCIVDIREHDVPYHVRV 230
            :..|:||..:..:...|..:|:               |||:   ||.:|.:||:||:|||||||.
plant   149 LHIVERNLAKFNALEAYESILS---------------GKREQRPQDCLDSVVDLREYDVPYHVRF 198

  Fly   231 SIDLRIFCGQWYNIRCRSGVELPTITCRPDILDRPEPVVLAFDIETTKLPLKFPDAQTDQVMMIS 295
            :||..:..|||||:...|...:  :..|.|:|.|.|..|.||||||.|||||||||:.||:||||
plant   199 AIDNDVRSGQWYNVSISSTDVI--LEKRTDLLQRAEVRVCAFDIETVKLPLKFPDAEYDQIMMIS 261

  Fly   296 YMIDGQGYLITNREIISSNVDDFEYTPKPEFEGNFIVFNEENEMQLLQRFFDHIMEVRPHIIVTY 360
            ||:||||:||||||.:..:::|.||||||||||.|.|.|..||::||:::|.|:.|::|.|.|||
plant   262 YMVDGQGFLITNRECVGKDIEDLEYTPKPEFEGYFKVTNVTNEVELLRKWFSHMQELKPGIYVTY 326

  Fly   361 NGDFFDWPFVETRAAVYDLDMKQEIGF-SKLRDGNYLSRPAIHMDCLCWVKRDSYLPVGSQGLKA 424
            |||||||||:|.||:.:.:.|.:|:|| .....|...::...|:||..|||||||||.|||||||
plant   327 NGDFFDWPFIERRASHHGIKMNEELGFRCDQNQGECRAKFVCHLDCFSWVKRDSYLPQGSQGLKA 391

  Fly   425 VAKAKLRYDPVELDPEDMCRMAVEQPQVLANYSVSDAVATYYLYMKYVHPFIFALNTIIPMEPDE 489
            |.|.||.|||:|::||||.|.|:|:||.:|:||||||||||||||.|||||:|:|.|||||.|||
plant   392 VTKVKLGYDPLEVNPEDMVRFAMEKPQTMASYSVSDAVATYYLYMTYVHPFVFSLATIIPMVPDE 456

  Fly   490 ILRKGSGTLCETLLMVEAYHAQIVYPNKHQSELNKLSNEGHVLDSETYVGGHVEALESGVFRADI 554
            :||||||||||.|||||||.|.:|.|||:|::..|. .:|.:|:||||:|||||.|:|||||:||
plant   457 VLRKGSGTLCEMLLMVEAYKANVVCPNKNQADPEKF-YQGKLLESETYIGGHVECLQSGVFRSDI 520

  Fly   555 PCRFRLDPAMVKQLQEQVDAVLRHAIEVEEGIPLEKVLNLDEVRQEIVQGLQGLHDIPNRLEQPV 619
            |..|:||.:..:||.:.:...|.:||.||..:.::.|.|.|||::.|.:.|:.|.|.|.|.|.|:
plant   521 PTSFKLDASAYQQLIDNLGRDLEYAITVEGKMRMDSVSNFDEVKEVIREKLEKLRDDPIREEGPL 585

  Fly   620 IYHLDVGAMYPNIILTNRLQPSAMVSDLDCAACDFNKPGVRCKRSMDWLWRGEMLPASRNEFQRI 684
            ||||||.||||||||||||||.::|:|..|.|||||.|...|.|.::|:|||.....:::|:..:
plant   586 IYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNGPEKTCLRKLEWVWRGVTFKGNKSEYYHL 650

  Fly   685 QQQLETEKFPPLFPGGPQRAFHELSKEDQAAYEKKRLTDYCRKAYKKTKLTK--LETRTSTICQK 747
            ::|:|:|...........:.|.:|.|.:|.:..|:||..||:|||.:. |.|  .|.|.:.||.:
plant   651 KKQIESESVDAGANMQSSKPFLDLPKVEQQSKLKERLKKYCQKAYSRV-LDKPITEVREAGICMR 714

  Fly   748 ENSFYVDTVRAFRDRRYEYKGLTKVAKASVNAAVASGDAAEIKAAKGREVLYDSLQLAHKCILNS 812
            ||.|||||||:|||||||||.|.||.|..::.|.|||:..:|:.|....|:||||||||||||||
plant   715 ENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNLIKIQEAHDMVVVYDSLQLAHKCILNS 779

  Fly   813 FYGYVMRRGARWHSMPMAGIVCLTGSNIITKAREIIERVGRPLELDTDGIWCILPGSFPQEFTIH 877
            |||||||:||||:||.|||:|..||:.||..||.:|||:|:|||||||||||.||||||:.||..
plant   780 FYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCALPGSFPENFTFK 844

  Fly   878 TSHEKKKKINISYPNAVLNTMVKDHFTNDQYHEL----RKDKENNLPKYDIRDENSIFFEVDGPY 938
            |.  ..||..||||..:||..|..:.:||||..|    ||       .|:.|.|.||.|||||||
plant   845 TI--DMKKFTISYPCVILNVDVAKNNSNDQYQTLVDPVRK-------TYNSRSECSIEFEVDGPY 900

  Fly   939 LAMVLPAAKEEGKKLKKRYAVFNFDGTLAELKGFEVKRRGELQLIKNFQSSVFEAFLAGSTLEEC 1003
            .||::||:||||..:||||||||.|||:|||||||:||||||:|||.||:.:|:.||.|||||||
plant   901 KAMIIPASKEEGILIKKRYAVFNHDGTIAELKGFEMKRRGELKLIKVFQAELFDKFLHGSTLEEC 965

  Fly  1004 YASVAKVADYWLDVLYSRGSNLPDSELFELISENKSMSKKLEEYGAQKSTSISTAKRLAEFLGEQ 1068
            |::||.||:.|||:|..:|.::.||||.:.|||:.:|||.|.:||.|||.:::||||||:|||:.
plant   966 YSAVAAVANRWLDLLEGQGKDIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDT 1030

  Fly  1069 MVKDAGLACKYIISKKPEGAPVTERAIPLAIFQSEPSVRRHHLRRWLKDNTMGDADIRDVLDWNY 1133
            ||||.||.|:||::::|||.||:|||:|:||||::...::.:|::|.|.::.  ..||.::||.|
plant  1031 MVKDKGLRCQYIVAREPEGTPVSERAVPVAIFQTDDPEKKFYLQKWCKISSY--TGIRSIIDWMY 1093

  Fly  1134 YIERLGGTIQKIITIPAALQGLANPVPRVQHPDWLHKKMLEKNDVLKQRRINEMFTSRPKPKPLA 1198
            |.:||...|||:||||||:|.:||||.||:||.||.||:.:|   .:|.:|.:||:|..|... .
plant  1094 YKQRLHSAIQKVITIPAAMQKVANPVLRVRHPYWLEKKVCDK---FRQGKIVDMFSSANKDHS-T 1154

  Fly  1199 TEEDKLADMEDLAGKDGGEGAAGCPIVTKRKRIQLEEHDDEEAQPQATTWRQALGAPPPIGETRK 1263
            |:::.:||:|:...::........|:.   :..:::.:..|..|.:  :|      .|...:...
plant  1155 TQDNVVADIEEFCKENRPSVKGPKPVA---RSFEVDRNHSEGKQQE--SW------DPEFHDISL 1208

  Fly  1264 TIVE-------WVRFQKKKWKWQQDQRQRNRQAS-------------KRTRGEDPPVVRATGSTA 1308
            ..|:       |:..:|:|||.....:::.|.:|             |..:|.           .
plant  1209 QNVDKNVDYQGWLELEKRKWKMTLTNKKKRRYSSSLFGFDLEQNINKKVCKGR-----------V 1262

  Fly  1309 TLGGFLRRAQRTLLDQPWQIVQLVPVDDLGHFTVWALIGEELHKIKLTVPRIFYVNQRSAAPPEE 1373
            .:|.:.||.:..|.....||:|||.....|.|..|.::...:.||.||:||:||:|.:::.   .
plant  1263 GVGSYFRRPEEALTSSYLQIIQLVQSPQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKASI---A 1324

  Fly  1374 GQLWRK-VNRVLPRSRPVFNLYRYSVPEQLFRDNSLGMLADLATPDIEGIYETQMTLEFRALMDM 1437
            |....| :|::||..:|.:||...::.|..|...|..:.|.||.|:|||||||:|.|||.|:..:
plant  1325 GNFTGKCINKILPHGKPCYNLMEVNIQEDQFIKESKKLAALLADPEIEGIYETKMPLEFSAICQI 1389

  Fly  1438 GCICGVQREEARRLAQLATKDLETFSIEQLEQRPQTQVKYLASANNRLRKIYLYQHNTPTAKKEI 1502
            ||:|.::.....|..|      :.:.:.:|.:...|:.:||   .|.:..:||| |:|.|. :.:
plant  1390 GCVCKIEDTAKHRNTQ------DGWKLGELHRITTTECRYL---ENSIPLVYLY-HSTSTG-RAV 1443

  Fly  1503 WSLILMPSKKAFVFALDTVRANQMPNMRQLYTAERLALLKNLTAEEQDKIPVEDYTFE-VLIEVD 1566
            :.|....||     .:..|..|...:...|.:|     |:....:...::..|.:::: :|.:|:
plant  1444 YVLYCHASK-----LMSVVVVNPYGDKELLSSA-----LERQFRDRCQELSPEPFSWDGILFQVE 1498

  Fly  1567 V----KQIYRHIQRALTTYKQEHQGPTILCLQTALSARKLSLAMPILLEFPQAEIHISDDASLLS 1627
            .    :...:.:|:||..|::|:.|.|:..::.. ........:..|.:||...|..:||.:...
plant  1499 YVDHPEAATKFLQKALCEYREENCGATVAVIECP-DFNTTKEGVKALEDFPCVRIPFNDDDNSYQ 1562

  Fly  1628 GLDWQRQGSRAVIRHFLNLNNVLDLMLDQCRYFHVPIGNMPPDTVLFGADLFFARLLQRHNFVLW 1692
            .:.|||..::..:....:....||..:.|.||.|||:||...|.:.|..|:|.:|.|:....|||
plant  1563 PVSWQRPAAKIAVLRCASAIQWLDRRIAQSRYAHVPLGNFGRDWLTFTVDIFLSRALRDQQQVLW 1627

  Fly  1693 WSASTRPDLGGREADDSRLLAEFEESISVVQNKAGFYPDVCVELALDSLAVSALLQSTRIQEMEG 1757
            .|.:..||||....:::.|..|.:|:..:.   .|.|..|.|||.:..|||:|||:|..:.||||
plant  1628 VSDNGVPDLGDINNEETFLADELQETSLLF---PGAYRKVSVELKVHRLAVNALLKSDLVSEMEG 1689

  Fly  1758 ASSAITFDVMPQVSLEEMIGTVPAATL----PSYDETALCSAAFRVMRSMVNGWLREVSINRNIF 1818
            ..               .:|.....:.    .|:||...|:.||||::.::...|.:...:.||:
plant  1690 GG---------------FLGVNSRGSSLNDNGSFDENNGCAQAFRVLKQLIKRLLHDACNSGNIY 1739

  Fly  1819 SDFQIVHFYRWVRSSNALLYDPALRRSLNNLMRKMFLRIIAEFKRLGATIIYADFNRIILSSGKK 1883
            :|..:.|...|:||.::.|:||||...|:.:|:|:|..::.:.:||||.||||||:::|:.:||.
plant  1740 ADSILQHLSWWLRSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAIIIYADFSKVIIDTGKF 1804

  Fly  1884 TVSDALGYVDYIVQSLRNKEMFHSIQLSFEQCWNFMLWMDQANFSGIRGKLPKGIDETVSSIVST 1948
            .:|.|..|.:.::..:.::::|..|.|.....|:.:|:|||.|::|||.                
plant  1805 DLSAAKTYCESLLTVMGSRDIFKLILLEPVHYWHSLLFMDQHNYAGIRA---------------- 1853

  Fly  1949 TMIRDSERNQDDDEDEEEDSENRDPVESNEAEQDQEDELSLELNWTIGEHLPD------------ 2001
                                 ..|.:..|        |:::|..|::..|||:            
plant  1854 ---------------------TGDEISGN--------EVTIEPKWSVARHLPEYIQKDFIIIVAT 1889

  Fly  2002 --------------------ENECREKF-ESLLTLFMQSLAEK-KTTEQAIKDISHCAFDFILKL 2044
                                |.|..|.. |.:.|.|:..:.|| ......||||:        ..
plant  1890 FIFGPWKFALEKKRGSAESLEAEMVEYLKEQIGTRFISMIVEKIGNIRSHIKDIN--------VS 1946

  Fly  2045 HKNYGKGKPSPG---LELIRTLIKALSVDKTLAEQINELRRNMLRLVGIGEFSDLAEWEDPCDSH 2106
            ..::..|:...|   .|.|:.:...|::|:.:.:.:..:|:.:|:.:.:.|.:..||:.||..|.
plant  1947 DASWASGQAPKGDYTFEFIQIITAVLALDQNVQQDVLVMRKILLKYIKVKECAAEAEFIDPGPSF 2011

  Fly  2107 IINEVICKACNHCRDLDLCKDKHRAMKDGVPVWLCA--QCYVAYDNEEIEMRMLDALQRKMMSYV 2169
            |:..|.|..|...||||.|:|.....:   ..|.||  ||...||.|:||..::..::::...|.
plant  2012 ILPNVACSNCGAYRDLDFCRDSALLTE---KEWSCADPQCVKIYDKEQIESSIIQMVRQRERMYQ 2073

  Fly  2170 LQDLRCSRCSEIKRENLAEFCTCAGNFVPLISGKDIQTLLGTFNKVAANHKMQLLQQTV 2228
            ||||.|:||:::|..:|.|.|.|:|:|....||.|....:..|..:|...|.:||::.:
plant  2074 LQDLVCNRCNQVKAAHLTEQCECSGSFRCKESGSDFHKRIEIFLDIAKRQKFRLLEECI 2132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-epsilon255NP_524462.2 DNA_polB_epsilon_exo 266..469 CDD:99822 127/203 (63%)
POLBc_epsilon 529..1154 CDD:99918 342/630 (54%)
DUF1744 1529..1930 CDD:369900 117/409 (29%)
TIL2NP_001325161.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 336 1.000 Domainoid score I252
eggNOG 1 0.900 - - E1_COG0417
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4539
Inparanoid 1 1.050 1610 1.000 Inparanoid score I8
OMA 1 1.010 - - QHG55019
OrthoDB 1 1.010 - - D39650at2759
OrthoFinder 1 1.000 - - FOG0004282
OrthoInspector 1 1.000 - - otm2849
orthoMCL 1 0.900 - - OOG6_101586
Panther 1 1.100 - - O PTHR10670
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3018
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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