DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnt and fli1rs

DIOPT Version :9

Sequence 1:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_009290803.1 Gene:fli1rs / 386723 ZFINID:ZDB-GENE-031114-3 Length:496 Species:Danio rerio


Alignment Length:680 Identity:157/680 - (23%)
Similarity:220/680 - (32%) Gaps:315/680 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 FKSPASSHLNS-VGSPSILSQLNGIG---NSGNHSGQVSTMRLKKNRKVTFLSSLVESKNIFIKE 119
            |..|.:.|:.: :|||::..|.:...   ...:.||..:....|:...:...|          .|
Zfish    33 FSGPQAMHMKAEIGSPAVFRQASEESIEPTEPDWSGSAAQNSAKRAEHINGTS----------HE 87

  Fly   120 EPIHGCKDLCSLSDISDH-----------EASLEVP-----TALPPLTPGTNRKVNEVLKASFAS 168
            .|:.     ||::..:.|           :||...|     ||.||               |..:
Zfish    88 SPVD-----CSVTKRTRHMSNSDGGQLSYQASYPEPRSSPQTATPP---------------SSTT 132

  Fly   169 WEKEVQKCNITKDPREWTEEHVIYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDLGKEKFLAITPP 233
            .||.|   .:..||..||::||..|::||..|::|..:::..|..:.|:|:..|.||..:.||..
Zfish   133 EEKRV---IVPADPEVWTQDHVRQWVDWAIKEYALSDVDVSLFQTLDGKALCKLSKEDMMRITSA 194

  Fly   234 FTGDILWEHLDILQKDCEKPNEDIVHGNSFESATTASVCGSDHQVANYPNETHANSNNSSINSRL 298
            :..|||..||:.|:                ||:.|.|          ||.               
Zfish   195 YNTDILLSHLNYLR----------------ESSPTFS----------YPT--------------- 218

  Fly   299 SMDYVTSAGNSDNKNFHRATPHSHNGYNTSNTHDRINNSTPPQQQQSQQPTVNGSGSASSNNNNS 363
                                       |.:||.        ||                      
Zfish   219 ---------------------------NPTNTQ--------PQ---------------------- 226

  Fly   364 MLPPAVQQSNNENNNTSSSNTNNSSNNNNNSGGSNNSNAGSNNNNNNNNNINFMAAAAIFQHHLK 428
               |.||....||:                                                  .
Zfish   227 ---PRVQVKAAENS--------------------------------------------------F 238

  Fly   429 EEPGTQNGNIGGYGGGSNSQNDPTDLSSYGLPAHLAAYGGGSGSGPTGGRSSGGGGDESDYHSTI 493
            ||.|.:|                 ..||.||||           .|.|                 
Zfish   239 EEIGRRN-----------------SWSSSGLPA-----------VPKG----------------- 258

  Fly   494 SAQDHQSQQSSGGNGSGGASGGSTGNSNGYLDSSSEFYGSYAGRNRFHDGYPPEFTPYDAQSFQS 558
            |..:||.                                    ..|..:  ||...|.|  .:|:
Zfish   259 SPIEHQH------------------------------------NTRITE--PPPRLPQD--PYQA 283

  Fly   559 MGPQPTAMDQWGAAHAH------QHPAAYMSTLGLDKGLLGGYTTQGGVPCFTGSGPIQLWQFLL 617
            :|...:.:....|...|      :..::::.....|:.:              |||.||||||||
Zfish   284 LGSISSRLANPEAKPIHTKNRTTKQNSSHLPVSSTDRTV--------------GSGQIQLWQFLL 334

  Fly   618 ELLLDKTCQSFISWTGDGWEFKLTDPDEVARRWGIRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG 682
            |||.|....:.|:|.|...|||:|||||||:|||.||:||.|||:||||.|||||||||:.|..|
Zfish   335 ELLSDSNNSTIITWEGTNGEFKMTDPDEVAKRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG 399

  Fly   683 KRYVYRFVCDLQNL----VGHTPEELVAKY 708
            |||.|:|  |.|.:    ..|:.|..|.|:
Zfish   400 KRYAYKF--DFQGISQSHQNHSTEGSVYKF 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879 25/70 (36%)
ETS 609..693 CDD:197710 55/83 (66%)
fli1rsXP_009290803.1 SAM_superfamily 127..216 CDD:301707 35/132 (27%)
ETS 326..409 CDD:197710 56/84 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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