DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnt and aop

DIOPT Version :9

Sequence 1:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001259908.1 Gene:aop / 33392 FlyBaseID:FBgn0000097 Length:732 Species:Drosophila melanogaster


Alignment Length:612 Identity:137/612 - (22%)
Similarity:217/612 - (35%) Gaps:186/612 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LEVPTALPPLTPGTNRKVNEVLKASFASWEKEVQKC-----------------NITKDPREWTEE 188
            |.|..:|..|.||.              |...:.:|                 ::..|||.|:.|
  Fly     7 LPVQLSLNSLNPGI--------------WSDVLWRCPPAPSSQLAELKTQLPPSLPSDPRLWSRE 57

  Fly   189 HVIYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDLGKEKFLAITPPFTGDILWEHLDIL-----QK 248
            .|:.:|.:...||.|..::.| .::|.|:|:..|.:..| ....|..||:|...|.:|     ..
  Fly    58 DVLVFLRFCVREFDLPKLDFD-LFQMNGKALCLLTRADF-GHRCPGAGDVLHNVLQMLIIESHMM 120

  Fly   249 DCEKPNEDIVHGNSFESATTASVCGSDHQVANYPNETHANSNNSS---INSRLSMDYVTSAGNSD 310
            ....||..:.                  ..:.||...|::....:   :|:           ..:
  Fly   121 QWHLPNSPVT------------------PTSRYPLSPHSHPPTPTWPPLNA-----------PPE 156

  Fly   311 NKNFHRATPHSHNGYNTSNTHDRINNS---TPPQQQQS------QQPTVNGSGSASSNNNNSMLP 366
            |..|| ::.||..|:     |....||   :||....|      |.|..||..:.::..:.....
  Fly   157 NSPFH-SSAHSLAGH-----HFMAPNSVTLSPPPSVDSQASSPPQAPYQNGGATGAAPGSAGGSA 215

  Fly   367 PAVQQSNNENNNTSSSNTNNSSNNNNNSGGSNN-------SNAGSNNNNNNNNNINFMAAAAIFQ 424
            ||...:.|.:|.||||.::..||     |...|       |:|.||::::               
  Fly   216 PAAGGATNTSNPTSSSASSTGSN-----GSQPNIMPMKGISSASSNHSDS--------------- 260

  Fly   425 HHLKEEPGTQNGNIGGYGGGSNSQNDPTDLSSYGLPAHLAAYGGGSGSGPTGGRSSGGGGDESDY 489
               :||....:|.:        |:..|..||          |...|..|....:.......:...
  Fly   261 ---EEEYSETSGGV--------SKMPPAPLS----------YSTASPPGTPILKDIKPNWTQQLT 304

  Fly   490 HSTISAQDHQSQQSSGGNGSGGASGGSTGNSNGYLDSSSEFYGSYAGRNRFHDGYPPEFTPYDAQ 554
            :|.:::...|.||......:..|                    :.|.:.:.|.        ...|
  Fly   305 NSFVNSWSQQQQQQQQQQAAAVA--------------------AVAAQAQQHQ--------LQQQ 341

  Fly   555 SFQSMGPQPTAMDQ---------WGAAHAHQHPAAYMSTLGLDKGLLGGYTTQGGVPCFTGSGPI 610
            ..|...||...:|.         .|:..|...| :||.....:      :..:...|...|.   
  Fly   342 QQQQQLPQKLTLDNTAGPVVTPAGGSISAPTTP-SYMYKAKRE------FFPENSEPNTNGR--- 396

  Fly   611 QLWQFLLELLLDKT--CQSFISW-TGDGWEFKLTDPDEVARRWGIRKNKPKMNYEKLSRGLRYYY 672
            .||.||.:||.|:.  ....|:| ..|...||:.||..:|:.|||:||...|||:|:||.|||||
  Fly   397 LLWDFLQQLLNDRNQKYSDLIAWKCRDTGVFKIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYY 461

  Fly   673 DKNIIHKTAGKRYVYRFV---CDLQNL 696
            ..||:.|..|:|:.|:|:   .:|:|:
  Fly   462 RVNILRKVQGERHCYQFLRNPTELKNI 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879 22/75 (29%)
ETS 609..693 CDD:197710 38/89 (43%)
aopNP_001259908.1 SAM_PNT-Tel_Yan 49..116 CDD:176085 22/68 (32%)
ETS 395..482 CDD:197710 39/89 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I3709
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11849
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.060

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