DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnt and ets2

DIOPT Version :9

Sequence 1:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001018874.1 Gene:ets2 / 326672 ZFINID:ZDB-GENE-050522-552 Length:439 Species:Danio rerio


Alignment Length:628 Identity:194/628 - (30%)
Similarity:262/628 - (41%) Gaps:212/628 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 FLSSLVESKNIFIKEEPIHGCKDLCSLSDISDHEASLEVPTAL------------PPLTPGTNRK 157
            |.::|.......:.|:|:......|.|   .:.:|:.|||:.|            |.|||.:...
Zfish     8 FRNTLKRQAAFELFEDPMSLFSGFCPL---EEEQAAQEVPSGLDCFPQDAGVCSVPLLTPCSKAV 69

  Fly   158 VNEVLKASFASWEKEVQKCNITKDPREWTEEHVIYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDL 222
            |::.||.||:.:.|..:.|.|:.:||.||::.|:.||.||..||||.:::...| .|.||.:.:|
Zfish    70 VSQALKDSFSGFSKVQRICGISDNPRRWTKQQVLQWLYWASGEFSLTNISFFSF-DMSGRELCEL 133

  Fly   223 GKEKFLAITPPFTGDILWEHLDILQKDCEKPNEDIVHGNSFESATTASVCGSDHQVANYPNETHA 287
            ||::||.:.|.|.||||||||:.:.:.|.:..|..|...|:.|:.:...|.     ...||    
Zfish   134 GKDRFLDLAPDFVGDILWEHLEQMMRGCVEDEELKVSDCSWPSSLSLDECS-----LTAPN---- 189

  Fly   288 NSNNSSINSRLSMDYVTSAGNSDNKNFHRATPHSHNGYNTSNTHDRINNSTPPQQQQSQQPTVNG 352
                                           |||                               
Zfish   190 -------------------------------PHS------------------------------- 192

  Fly   353 SGSASSNNNNSMLPPAVQQSNNENNNTSSSNTNNSSNNNNNSGGSNNSNAGSNNNNNNNNNINFM 417
                      |:|....|.|                                       ::...:
Zfish   193 ----------SLLRELFQTS---------------------------------------DDAALL 208

  Fly   418 AAAAIFQHHLKEEPGTQNGNIGGYGGGSNSQNDPTDLSSYGLPAHLAAYGGGSGSGPTGGRSSGG 482
            |:||......|.:..|.:..   |.....::|.|.                        .|::|.
Zfish   209 ASAAELPACAKPQLSTVSVR---YRSHEFTKNTPQ------------------------LRTAGS 246

  Fly   483 GGDESDYHSTISAQDHQSQQSSGGNGSGGASGGSTGNSNGYLDSSSEFYGSYAGRNRFHDGYPPE 547
            .|:::...|..||::...:              |.|:.:...|:.         |...:|.:..|
Zfish   247 SGEQASQESVESAEECVLR--------------SWGSHSSLADTQ---------RVPSYDSFEEE 288

  Fly   548 FTPYDAQ----SFQSMGPQPTAMDQWGAAHAHQHPAAYMSTLGLDKGLLGGYTTQGGVPCFTGSG 608
            ..|...|    ||:....:.....:.|....   |||          :|.|         |||||
Zfish   289 LLPLGLQKHGRSFKDYVQERNQTQETGRPVI---PAA----------VLAG---------FTGSG 331

  Fly   609 PIQLWQFLLELLLDKTCQSFISWTGDGWEFKLTDPDEVARRWGIRKNKPKMNYEKLSRGLRYYYD 673
            ||||||||||||.|.||||.|||||||||||||||||||||||.|||||||||||||||||||||
Zfish   332 PIQLWQFLLELLTDSTCQSIISWTGDGWEFKLTDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYD 396

  Fly   674 KNIIHKTAGKRYVYRFVCDLQNLVGHTPEELVAKYDLKIEKKD 716
            |||||||:|||||||||||||||:|:|.|||.....::.:.:|
Zfish   397 KNIIHKTSGKRYVYRFVCDLQNLLGYTVEELHGLLGVQPDSED 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879 32/70 (46%)
ETS 609..693 CDD:197710 78/83 (94%)
ets2NP_001018874.1 SAM_superfamily 76..164 CDD:301707 38/88 (43%)
ETS 332..416 CDD:197710 78/83 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 165 1.000 Domainoid score I3885
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 311 1.000 Inparanoid score I2588
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243757at33208
OrthoFinder 1 1.000 - - FOG0003547
OrthoInspector 1 1.000 - - oto39977
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11849
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10367
SonicParanoid 1 1.000 - - X2422
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.100

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