DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnt and Fli1

DIOPT Version :10

Sequence 1:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001017381.1 Gene:Fli1 / 315532 RGDID:1309837 Length:452 Species:Rattus norvegicus


Alignment Length:653 Identity:144/653 - (22%)
Similarity:185/653 - (28%) Gaps:353/653 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 SLSDISDHE--------ASLEVPTA------------------LPPLTPGTNRKVNEVLKASF-- 166
            :||.:||.:        |:..:|.|                  |||.....|:.|...:|..:  
  Rat     8 ALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRVNVKREYDH 72

  Fly   167 --ASWEK----EVQKCN------------------------------------ITKDPREWTEEH 189
              .|.|.    .|.|||                                    :..||..||:||
  Rat    73 MNGSRESPVDCSVSKCNKLVGGGEANPMNYNSYMDEKNGPPPPNMTTNERRVIVPADPTLWTQEH 137

  Fly   190 VIYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDLGKEKFLAITPPFTGDILWEHLDILQKDCEKPN 254
            |..||.||..|:.|:.::...|..|.|:.:..:.||.||..|..:..::|..||..|:       
  Rat   138 VRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMSKEDFLRATSLYNTEVLLSHLSYLR------- 195

  Fly   255 EDIVHGNSFESATTASVCGSDHQVANYPNETHANSNNSSINSRLSMDYVTSAGNSDNKNFHRATP 319
                     ||:..|                                                  
  Rat   196 ---------ESSLLA-------------------------------------------------- 201

  Fly   320 HSHNGYNTSNTHDRINNSTPPQQQQSQQPTVNGSGSASSNNNNSMLPPAVQQSNNENNNTSSSNT 384
                 |||                                                     .|:|
  Rat   202 -----YNT-----------------------------------------------------PSHT 208

  Fly   385 NNSSNNNNNSGGSNNSNAGSNNNNNNNNNINFMAAAAIFQHHLKEEPGTQNGNIGGYGGGSNSQN 449
            :.||..|                                   :||:|...:...||:....||  
  Rat   209 DQSSRLN-----------------------------------VKEDPSYDSVRRGGWSNNMNS-- 236

  Fly   450 DPTDLSSYGLPAHLAAYGGGSGSGPTGGRSSGGGGDESDYHSTISAQDHQSQQSSGGNGSGGASG 514
                              |.:.|.|.||..|.|...|.                           
  Rat   237 ------------------GINKSPPLGGAQSMGKNTEQ--------------------------- 256

  Fly   515 GSTGNSNGYLDSSSEFYGSYAGRNRFHDGYPPEFTPYDAQSFQSMGPQPTAMDQWGAAHAHQHPA 579
                                          .|:..||     |.:||..:.:         .:| 
  Rat   257 ------------------------------RPQPDPY-----QILGPTSSRL---------ANP- 276

  Fly   580 AYMSTLGLDKGLLGGYTTQGGVPCFTGSGPIQLWQFLLELLLDKTCQSFISWTGDGWEFKLTDPD 644
                                      |||.|||||||||||.|....|.|:|.|...|||:||||
  Rat   277 --------------------------GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPD 315

  Fly   645 EVARRWGIRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDL----QNLVGHTPEELV 705
            |||||||.||:||.|||:||||.|||||||||:.|..||||.|:|  |.    |.|..|..|..:
  Rat   316 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKF--DFHGIAQALQPHPTETSM 378

  Fly   706 AKY 708
            .||
  Rat   379 YKY 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879 25/70 (36%)
ETS 609..693 CDD:197710 57/83 (69%)
Fli1NP_001017381.1 SAM_PNT-FLI-1 114..204 CDD:188883 29/160 (18%)
ETS 280..363 CDD:197710 58/84 (69%)

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