DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnt and elk-2

DIOPT Version :9

Sequence 1:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001362039.1 Gene:elk-2 / 190623 WormBaseID:WBGene00022207 Length:244 Species:Caenorhabditis elegans


Alignment Length:297 Identity:55/297 - (18%)
Similarity:90/297 - (30%) Gaps:102/297 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 LSMDYVTSAGNSDNKNFHRATPHSHNGYNTSNTHDRINNSTPPQQQQSQQPTVNGSGSA------ 356
            :.|.||     .|.|:.....|    .:.||       ...||.....|.|..|...||      
 Worm     3 MKMCYV-----KDEKDIRHEIP----SFMTS-------LQAPPPPPPPQNPRGNTDFSALSLLGT 51

  Fly   357 SSNNNNSMLPPAVQQS-NNENNNTSSSNTNNSSNNNNNSGGSNNSNAGSNNNNNNN--------- 411
            .|...:|:..|:...| .:.:::.:||.|.::|:..:.|......:..|:...:..         
 Worm    52 DSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSSSTTPSTTAPPQPPTKK 116

  Fly   412 ----NNINFMAAA-------------AIFQHHLKEEPGTQNGNIGGYGGGSNSQNDPTDLSSYGL 459
                |.:|..|.:             .:.|||                     ||.|...:..  
 Worm   117 GMKPNPLNLTATSNFSLQPSISSPLLMLQQHH---------------------QNSPLFQAQI-- 158

  Fly   460 PAHLAAYGGGSGSGPTGGRSSGGGGDESDYHSTISAQDHQSQQSSGGNGSGGASGGSTGNSNGYL 524
             :.|..|...:.:|..|.:.|.....:|.:.|.:....:.      |.|..|:||.:.|     |
 Worm   159 -SQLYTYAALASAGLYGPQISPHLASQSPFRSPLVTPKNL------GLGELGSSGRTPG-----L 211

  Fly   525 DSSSEFYGSYAGRNRFHDGYPPEFTPYDAQSFQSMGP 561
            ..|..|.            :||      ..:||:..|
 Worm   212 GESQVFQ------------FPP------VSAFQATNP 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879
ETS 609..693 CDD:197710
elk-2NP_001362039.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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