DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnt and ets-8

DIOPT Version :9

Sequence 1:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_500046.2 Gene:ets-8 / 183631 WormBaseID:WBGene00016798 Length:141 Species:Caenorhabditis elegans


Alignment Length:82 Identity:35/82 - (42%)
Similarity:46/82 - (56%) Gaps:1/82 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 LWQFLLELLLDKTCQSFISWT-GDGWEFKLTDPDEVARRWGIRKNKPKMNYEKLSRGLRYYYDKN 675
            |:|.:|:...||.....|.|| ....||::.|..||||.||..|...||:||.|||.:|.||...
 Worm    32 LFQMILKSENDKNVAKIIKWTKKSSLEFQMVDRQEVARLWGAEKGNLKMDYEFLSRSIRSYYKSG 96

  Fly   676 IIHKTAGKRYVYRFVCD 692
            |:.|..||.:.|:|:.|
 Worm    97 IMRKIPGKDFRYQFIAD 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879
ETS 609..693 CDD:197710 35/82 (43%)
ets-8NP_500046.2 ETS 25..115 CDD:197710 35/82 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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