DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnt and Erg

DIOPT Version :9

Sequence 1:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_038943856.1 Gene:Erg / 170909 RGDID:621108 Length:486 Species:Rattus norvegicus


Alignment Length:722 Identity:151/722 - (20%)
Similarity:215/722 - (29%) Gaps:356/722 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ICKTDLSATKFMLPPALPSSAAIGSSSAVASTASHFLDKAAHELFQLNAINGHLFKSPASSHLNS 69
            :.||:::|:         ||:..|.:|.::.....               ...|.:.||...:..
  Rat    35 LAKTEMTAS---------SSSDYGQTSKMSPRVPQ---------------QDWLSQPPARVTIKM 75

  Fly    70 VGSPSILSQLNGIGNS---------GNHSGQVSTMRLKKNRKVTFLSSLVESKNIFIKEEPIHGC 125
            ..:|   ||:||..||         |...|...|:.:.       ..|.:|.|:           
  Rat    76 ECNP---SQVNGSRNSPDECSVTKGGKMVGSPDTVGMS-------YGSYMEEKH----------- 119

  Fly   126 KDLCSLSDISDHEASLEVPTALPPLTPGTNRKVNEVLKASFASWEKEVQKCNITKDPREWTEEHV 190
                                 :||....||.:                 :..:..||..|:.:||
  Rat   120 ---------------------MPPPNMTTNER-----------------RVIVPADPTLWSTDHV 146

  Fly   191 IYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDLGKEKFLAITPPFTGDILWEHLDILQKDCEKP-- 253
            ..||.||..|:.|:.:::..|..:.|:.:..:.|:.|..:||.:..|||..||..|:   |.|  
  Rat   147 RQWLEWAVKEYGLLDVDVLLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLR---ETPLP 208

  Fly   254 ---NEDIVHGNSFESATTASVCGSDHQVANYPNETHANSNNSSINSRLSMDYVTSAGNSDNKNFH 315
               ::|:                 |..:.|.|...||.                           
  Rat   209 HLTSDDV-----------------DKALQNSPRLMHAR--------------------------- 229

  Fly   316 RATPHSHNGYNTSNTHDRINNSTPPQQQQSQQPTVNGSGSASSNNNNSMLPPAVQQSNNENNNTS 380
                                               |..|:|....|.|:.|.|.|:.....:   
  Rat   230 -----------------------------------NTGGAAFIFPNTSVYPEATQRITTRPD--- 256

  Fly   381 SSNTNNSSNNNNNSGGSNNSNAGSNNNNNNNNNINFMAAAAIFQHHLKEEPGTQNGNIGGYGGGS 445
                                                          |..||..::...|      
  Rat   257 ----------------------------------------------LPYEPPRRSTWTG------ 269

  Fly   446 NSQNDPTDLSSYGLPAHLAAYGGGSGSGPTGGRSSGGGGDESDYHSTISAQDHQSQQSSGGNGSG 510
              .:.||..|....|:                            .||:...:.|.          
  Rat   270 --HSHPTPQSKAAQPS----------------------------PSTVPKTEDQR---------- 294

  Fly   511 GASGGSTGNSNGYLDSSSEFYGSYAGRNRFHDGYPPEFTPYDAQSFQSMGPQPTAMDQWGAAHAH 575
                                               |:..||     |.:||..:.:         
  Rat   295 -----------------------------------PQLDPY-----QILGPTSSRL--------- 310

  Fly   576 QHPAAYMSTLGLDKGLLGGYTTQGGVPCFTGSGPIQLWQFLLELLLDKTCQSFISWTGDGWEFKL 640
            .:|                           |||.|||||||||||.|.:..:.|:|.|...|||:
  Rat   311 ANP---------------------------GSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKM 348

  Fly   641 TDPDEVARRWGIRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDL----QNLVGHTP 701
            |||||||||||.||:||.|||:||||.|||||||||:.|..||||.|:|  |.    |.|..|.|
  Rat   349 TDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKF--DFHGIAQALQPHPP 411

  Fly   702 EELVAKY 708
            |..:.||
  Rat   412 ESSLYKY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879 23/70 (33%)
ETS 609..693 CDD:197710 56/83 (67%)
ErgXP_038943856.1 SAM_superfamily 122..205 CDD:417767 26/102 (25%)
ETS 317..400 CDD:197710 57/84 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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