DRSC/TRiP Functional Genomics Resources

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Protein Alignment bb8 and GDH1

DIOPT Version :10

Sequence 1:NP_651140.1 Gene:bb8 / 42756 FlyBaseID:FBgn0039071 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_015020.3 Gene:GDH1 / 854557 SGDID:S000005902 Length:454 Species:Saccharomyces cerevisiae


Alignment Length:526 Identity:139/526 - (26%)
Similarity:221/526 - (42%) Gaps:111/526 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DPEFSEMVLYYYHKAAQTMEPALLKEMEKYPHMKPEERQARVTAILNLLGSVSTSVEVNFPIVRK 104
            :|||.:.    |.:...::|.:.|.|..      ||.|  :|..|:::...:     :.|.:..:
Yeast     3 EPEFQQA----YEEVVSSLEDSTLFEQH------PEYR--KVLPIVSVPERI-----IQFRVTWE 50

  Fly   105 N--GTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEVKALAAIMTFKCACVNVPYGGSKGGICI 167
            |  |..|:..|||..:...:.|.|||:|:...||.|.:|.|.....||.:...:..||.|||:|:
Yeast    51 NDKGEQEVAQGYRVQYNSAKGPYKGGLRFHPSVNLSILKFLGFEQIFKNSLTGLDMGGGKGGLCV 115

  Fly   168 DPKKYTVDELQTITRRYTMELLKRNMIGPGIDVPAPDVNTGPREMSWIVDQYQKTFGYKDINS-S 231
            |.|..:.:|::.|...:..||.:.  ||...||||.|:..|.||:.::...|:   .||  || .
Yeast   116 DLKGRSNNEIRRICYAFMRELSRH--IGQDTDVPAGDIGVGGREIGYLFGAYR---SYK--NSWE 173

  Fly   232 AIVTGKPVHNGGINGRHSATGRGVWKAGDLFLKDKEWMD-LLKWKTGWKDKTVIVQGFGNVGSFA 295
            .::|||.::.||...|..|||.|      |....:..:| ....|..::.|.|.:.|.|||..:|
Yeast   174 GVLTGKGLNWGGSLIRPEATGYG------LVYYTQAMIDYATNGKESFEGKRVTISGSGNVAQYA 232

  Fly   296 AKYVHEAGAKVIGIKEFDVSLVNKDGIDINDLFEYTEEKKTIKG-------YPKAQESKEDLL-- 351
            |..|.|.|..|:.:.:....::::.||....:.:.:..|...|.       |....|:|...:  
Yeast   233 ALKVIELGGTVVSLSDSKGCIISETGITSEQVADISSAKVNFKSLEQIVNEYSTFSENKVQYIAG 297

  Fly   352 ------VAETDILMPCATQKVITTDNAKDIKA---KLILEGANGPTTPSGEKILL---------- 397
                  |.:.||.:|||||..::.:.||.:.|   |.|.||:|..:||  |.|.:          
Yeast   298 ARPWTHVQKVDIALPCATQNEVSGEEAKALVAQGVKFIAEGSNMGSTP--EAIAVFETARSTATG 360

  Fly   398 -DKGVLLVPDLYCNAGGVTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSINESLHECPDSQL 461
             .:.|...|....|.|||.||..|..:|...:::       |||.:                   
Yeast   361 PSEAVWYGPPKAANLGGVAVSGLEMAQNSQRITW-------TSERV------------------- 399

  Fly   462 PNICPNKKLKRIQ-QCTTEADIVDSALQTVMESAARGIKEMAHKFELCNDLRRAAYVWSSFKIFQ 525
                 :::||||. .|..|.  :|.|            |:.....::...|.:.|.:.|..|:..
Yeast   400 -----DQELKRIMINCFNEC--IDYA------------KKYTKDGKVLPSLVKGANIASFIKVSD 445

  Fly   526 AMESSG 531
            ||...|
Yeast   446 AMFDQG 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bb8NP_651140.1 GdhA 40..532 CDD:440103 139/526 (26%)
GDH1NP_015020.3 PRK09414 3..451 CDD:181834 138/524 (26%)

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