DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bb8 and GDH2

DIOPT Version :9

Sequence 1:NP_651140.1 Gene:bb8 / 42756 FlyBaseID:FBgn0039071 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_010066.1 Gene:GDH2 / 851311 SGDID:S000002374 Length:1092 Species:Saccharomyces cerevisiae


Alignment Length:539 Identity:119/539 - (22%)
Similarity:198/539 - (36%) Gaps:146/539 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LYYYHKAAQTMEPAL-LKEMEKY-PHMKPEERQARVT----------AILNLLGSVSTSV-EVNF 99
            ::|||.:.:.||..| .:.:||. |....:|.:|.:.          .||..|...:.|: :.||
Yeast   467 IHYYHNSTKDMEKTLSFQRLEKVEPFKNDQEFEAYLNKFIPNDSPDLLILKTLNIFNKSILKTNF 531

  Fly   100 PIVRK----------------------NGTYEIISG-YRSHHVRHRLPLKGGIRYA-------LD 134
            .|.||                      .|.:.::.. ::..|:|.|...:||||..       .|
Yeast   532 FITRKVAISFRLDPSLVMTKFEYPETPYGIFFVVGNTFKGFHIRFRDIARGGIRIVCSRNQDIYD 596

  Fly   135 VNESEV----KALAAIMTFKCACVNVPYGGSKGGICIDPKKYTVDELQTITRRYTMELLKRNMIG 195
            :|...|    ..||:....|..  ::|.|||||.|.::|.....|:......:|         :.
Yeast   597 LNSKNVIDENYQLASTQQRKNK--DIPEGGSKGVILLNPGLVEHDQTFVAFSQY---------VD 650

  Fly   196 PGIDVPAPD------VNTGPREMSWIVDQYQKTFGYKDINSS-----------AIVTGKPVHNGG 243
            ..||:...|      ||..|:|........:.|.|:.|..::           :.:|||....||
Yeast   651 AMIDILINDPLKENYVNLLPKEEILFFGPDEGTAGFVDWATNHARVRNCPWWKSFLTGKSPSLGG 715

  Fly   244 I-NGRHSATGRGVWKAGDLFLKDKEWMDL-----LKWKTGWKDKTVIVQGFGNVGSFAAKYVHEA 302
            | :..:..|..||....:   |..|.::|     .|::||..|        |::||... .:...
Yeast   716 IPHDEYGMTSLGVRAYVN---KIYETLNLTNSTVYKFQTGGPD--------GDLGSNEI-LLSSP 768

  Fly   303 GAKVIGIKEFDVSLVNKDGIDINDLFEYTEEKKTIKGYPKAQESKEDLLVA-------------- 353
            ....:.|.:....|.:..|:|.::|.....|:|.|..:..::.|.....|:              
Yeast   769 NECYLAILDGSGVLCDPKGLDKDELCRLAHERKMISDFDTSKLSNNGFFVSVDAMDIMLPNGTIV 833

  Fly   354 -------------------ETDILMPCATQ-KVITTDN------AKDIKAKL--ILEGANGPTTP 390
                               ..||.:||..: ..||.:|      .|..|.|:  |:||||...|.
Yeast   834 ANGTTFRNTFHTQIFKFVDHVDIFVPCGGRPNSITLNNLHYFVDEKTGKCKIPYIVEGANLFITQ 898

  Fly   391 SGEKILLDKGVLLVPDLYCNAGGVTVSYFEYLKNIN-------HVSYGKMNSKSTS---ELIIEL 445
            ..:..|.:.|.:|..|...|.||||.|..|.|.::.       |...|.::.:.::   ..::|:
Yeast   899 PAKNALEEHGCILFKDASANKGGVTSSSMEVLASLALNDNDFVHKFIGDVSGERSALYKSYVVEV 963

  Fly   446 MNSINESLHECPDSQLPNI 464
            .:.|.::. |....||.|:
Yeast   964 QSRIQKNA-ELEFGQLWNL 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bb8NP_651140.1 GdhA 72..532 CDD:223411 110/513 (21%)
ELFV_dehydrog_N 95..221 CDD:280903 36/166 (22%)
NAD_bind_1_Glu_DH 242..517 CDD:133445 62/281 (22%)
GDH2NP_010066.1 Bac_GDH 1..1092 CDD:421780 119/539 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344915
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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