DRSC/TRiP Functional Genomics Resources

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Protein Alignment bb8 and GDH3

DIOPT Version :9

Sequence 1:NP_651140.1 Gene:bb8 / 42756 FlyBaseID:FBgn0039071 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_009339.1 Gene:GDH3 / 851237 SGDID:S000000058 Length:457 Species:Saccharomyces cerevisiae


Alignment Length:489 Identity:135/489 - (27%)
Similarity:212/489 - (43%) Gaps:88/489 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DPEFSEMVLYYYHKAAQTMEPALLKEMEKYPHMKPEERQARVTAILNLLGSVSTSVEVNFPIVRK 104
            :|||.:.    |.:...::|.:  |..||:|..|         .:|.::......::........
Yeast     4 EPEFQQA----YDEIVSSVEDS--KIFEKFPQYK---------KVLPIVSVPERIIQFRVTWEND 53

  Fly   105 NGTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEVKALAAIMTFKCACVNVPYGGSKGGICIDP 169
            ||..|:..|||......:.|.|||:|:...||.|.:|.|.....||.|...:..||.|||:|:|.
Yeast    54 NGEQEVAQGYRVQFNSAKGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLDMGGGKGGLCVDL 118

  Fly   170 KKYTVDELQTITRRYTMELLKRNMIGPGIDVPAPDVNTGPREMSWIVDQYQKTFGYKDINS-SAI 233
            |..:.:|::.|...:..||.:.  ||...||||.|:..|.||:.::...|:   .||  || ..:
Yeast   119 KGKSDNEIRRICYAFMRELSRH--IGKDTDVPAGDIGVGGREIGYLFGAYR---SYK--NSWEGV 176

  Fly   234 VTGKPVHNGGINGRHSATGRGVWKAGDLFLKDKEWMD-LLKWKTGWKDKTVIVQGFGNVGSFAAK 297
            :|||.::.||...|..|||.|      |....:..:| ....|..::.|.|.:.|.|||..:||.
Yeast   177 LTGKGLNWGGSLIRPEATGFG------LVYYTQAMIDYATNGKESFEGKRVTISGSGNVAQYAAL 235

  Fly   298 YVHEAGAKVIGIKEFDVSLVNKDGI---DINDL------FEYTEEKKTIKGYPKAQESKEDLL-- 351
            .|.|.|..|:.:.:....::::.||   .|:|:      |:..||  .:..|....|||...:  
Yeast   236 KVIELGGIVVSLSDSKGCIISETGITSEQIHDIASAKIRFKSLEE--IVDEYSTFSESKMKYVAG 298

  Fly   352 ------VAETDILMPCATQKVITTDNAKDIKA---KLILEGANGPTTPSGEKIL---------LD 398
                  |:..||.:|||||..::.|.||.:.|   |.:.||||..:||....:.         ..
Yeast   299 ARPWTHVSNVDIALPCATQNEVSGDEAKALVASGVKFVAEGANMGSTPEAISVFETARSTATNAK 363

  Fly   399 KGVLLVPDLYCNAGGVTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSINESLHECPDSQLPN 463
            ..|...|....|.|||.||..|..:|...|::       |:|.:               |.:|..
Yeast   364 DAVWFGPPKAANLGGVAVSGLEMAQNSQKVTW-------TAERV---------------DQELKK 406

  Fly   464 I---CPNKKLKRIQQCTTEADIVDSALQTVMESA 494
            |   |.|..::..|:.:||.:  .:.|.::::.|
Yeast   407 IMINCFNDCIQAAQEYSTEKN--TNTLPSLVKGA 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bb8NP_651140.1 GdhA 72..532 CDD:223411 126/457 (28%)
ELFV_dehydrog_N 95..221 CDD:280903 42/125 (34%)
NAD_bind_1_Glu_DH 242..517 CDD:133445 75/286 (26%)
GDH3NP_009339.1 PRK09414 4..454 CDD:181834 135/489 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I2038
eggNOG 1 0.900 - - E1_COG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1193
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1271
OMA 1 1.010 - - QHG54967
OrthoFinder 1 1.000 - - FOG0001473
OrthoInspector 1 1.000 - - mtm9211
orthoMCL 1 0.900 - - OOG6_100455
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R306
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.710

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