DRSC/TRiP Functional Genomics Resources

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Protein Alignment bb8 and GDH1

DIOPT Version :9

Sequence 1:NP_651140.1 Gene:bb8 / 42756 FlyBaseID:FBgn0039071 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_197318.1 Gene:GDH1 / 831935 AraportID:AT5G18170 Length:411 Species:Arabidopsis thaliana


Alignment Length:438 Identity:166/438 - (37%)
Similarity:239/438 - (54%) Gaps:75/438 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VEVNFPIVRKNGTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEVKALAAIMTFKCACVNVPYG 159
            ::|...|.:.:||.....|:|..|...|.|:||||||..:|:..||.|||.:||:|.|...:|||
plant    35 IKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYG 99

  Fly   160 GSKGGICIDPKKYTVDELQTITRRYTMELLKRNMIGPGIDVPAPDVNTGPREMSWIVDQYQKTFG 224
            |:||||..||.|.::.||:.:||.:|.::  .::||...||||||:.|||:.|:||:|:|.|..|
plant   100 GAKGGIGCDPSKLSISELERLTRVFTQKI--HDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHG 162

  Fly   225 YKDINSSAIVTGKPVHNGGINGRHSATGRGVWKAGDLFLKDKEWMDLLKWKTGWKDKTV-----I 284
            |    |.|:|||||:..||..||.:||||||....:..|.:             ..||:     :
plant   163 Y----SPAVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNE-------------HGKTISGQRFV 210

  Fly   285 VQGFGNVGSFAAKYVHEAGAKVIGIKEFDVSLVNKDGIDINDLFEYTEEKKTIKGYPKAQE-SKE 348
            :||||||||:|||.:.|.|.|::.:.:...::.|||||||..|.::|:|.:.:||:..|.. ...
plant   211 IQGFGNVGSWAAKLISEKGGKIVAVSDITGAIKNKDGIDIPALLKHTKEHRGVKGFDGADPIDPN 275

  Fly   349 DLLVAETDILMPCATQKVITTDNAKDIKAKLILEGANGPTTPSGEKILLDKGVLLVPDLYCNAGG 413
            .:||.:.|||:|.|...||..:||.:||||.|:|.||.||.|..::||..|||:::||:|.|:||
plant   276 SILVEDCDILVPAALGGVINRENANEIKAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGG 340

  Fly   414 VTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSINESLHECPDSQLPNICPNKKLKRIQQCTT 478
            |||||||:::|                                                ||....
plant   341 VTVSYFEWVQN------------------------------------------------IQGFMW 357

  Fly   479 EADIVDSALQTVMESAARGIKEMAHKFELCNDLRRAAYVWSSFKIFQA 526
            |.:.|:..|:|.|..:.:.:|||. |...| |||..|:.....::.||
plant   358 EEEKVNDELKTYMTRSFKDLKEMC-KTHSC-DLRMGAFTLGVNRVAQA 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bb8NP_651140.1 GdhA 72..532 CDD:223411 166/438 (38%)
ELFV_dehydrog_N 95..221 CDD:280903 57/125 (46%)
NAD_bind_1_Glu_DH 242..517 CDD:133445 97/280 (35%)
GDH1NP_197318.1 PLN02477 1..410 CDD:178095 166/438 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1308
eggNOG 1 0.900 - - E1_COG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H70111
Inparanoid 1 1.050 281 1.000 Inparanoid score I872
OMA 1 1.010 - - QHG54967
OrthoDB 1 1.010 - - D692851at2759
OrthoFinder 1 1.000 - - FOG0001473
OrthoInspector 1 1.000 - - mtm1157
orthoMCL 1 0.900 - - OOG6_100455
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1737
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.740

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