DRSC/TRiP Functional Genomics Resources

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Protein Alignment bb8 and GDH1

DIOPT Version :10

Sequence 1:NP_651140.1 Gene:bb8 / 42756 FlyBaseID:FBgn0039071 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_197318.1 Gene:GDH1 / 831935 AraportID:AT5G18170 Length:411 Species:Arabidopsis thaliana


Alignment Length:438 Identity:166/438 - (37%)
Similarity:239/438 - (54%) Gaps:75/438 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VEVNFPIVRKNGTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEVKALAAIMTFKCACVNVPYG 159
            ::|...|.:.:||.....|:|..|...|.|:||||||..:|:..||.|||.:||:|.|...:|||
plant    35 IKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYG 99

  Fly   160 GSKGGICIDPKKYTVDELQTITRRYTMELLKRNMIGPGIDVPAPDVNTGPREMSWIVDQYQKTFG 224
            |:||||..||.|.::.||:.:||.:|.::  .::||...||||||:.|||:.|:||:|:|.|..|
plant   100 GAKGGIGCDPSKLSISELERLTRVFTQKI--HDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHG 162

  Fly   225 YKDINSSAIVTGKPVHNGGINGRHSATGRGVWKAGDLFLKDKEWMDLLKWKTGWKDKTV-----I 284
            |    |.|:|||||:..||..||.:||||||....:..|.:             ..||:     :
plant   163 Y----SPAVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNE-------------HGKTISGQRFV 210

  Fly   285 VQGFGNVGSFAAKYVHEAGAKVIGIKEFDVSLVNKDGIDINDLFEYTEEKKTIKGYPKAQE-SKE 348
            :||||||||:|||.:.|.|.|::.:.:...::.|||||||..|.::|:|.:.:||:..|.. ...
plant   211 IQGFGNVGSWAAKLISEKGGKIVAVSDITGAIKNKDGIDIPALLKHTKEHRGVKGFDGADPIDPN 275

  Fly   349 DLLVAETDILMPCATQKVITTDNAKDIKAKLILEGANGPTTPSGEKILLDKGVLLVPDLYCNAGG 413
            .:||.:.|||:|.|...||..:||.:||||.|:|.||.||.|..::||..|||:::||:|.|:||
plant   276 SILVEDCDILVPAALGGVINRENANEIKAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGG 340

  Fly   414 VTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSINESLHECPDSQLPNICPNKKLKRIQQCTT 478
            |||||||:::|                                                ||....
plant   341 VTVSYFEWVQN------------------------------------------------IQGFMW 357

  Fly   479 EADIVDSALQTVMESAARGIKEMAHKFELCNDLRRAAYVWSSFKIFQA 526
            |.:.|:..|:|.|..:.:.:|||. |...| |||..|:.....::.||
plant   358 EEEKVNDELKTYMTRSFKDLKEMC-KTHSC-DLRMGAFTLGVNRVAQA 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bb8NP_651140.1 GdhA 40..532 CDD:440103 166/438 (38%)
GDH1NP_197318.1 PLN02477 1..410 CDD:178095 166/438 (38%)

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