DRSC/TRiP Functional Genomics Resources

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Protein Alignment bb8 and GDH2

DIOPT Version :10

Sequence 1:NP_651140.1 Gene:bb8 / 42756 FlyBaseID:FBgn0039071 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_196361.1 Gene:GDH2 / 830635 AraportID:AT5G07440 Length:411 Species:Arabidopsis thaliana


Alignment Length:456 Identity:162/456 - (35%)
Similarity:242/456 - (53%) Gaps:72/456 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 ILNLLGSVSTS-------VEVNFPIVRKNGTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEVK 141
            ||.|...:..|       ::|...|.:.:||.....|:|..|...|.|:||||||..:|:..||.
plant    17 ILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVN 81

  Fly   142 ALAAIMTFKCACVNVPYGGSKGGICIDPKKYTVDELQTITRRYTMELLKRNMIGPGIDVPAPDVN 206
            |||.:||:|.|..::||||:||||...|:..::.||:.:||.:|.::  .::||...||||||:.
plant    82 ALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKI--HDLIGIHTDVPAPDMG 144

  Fly   207 TGPREMSWIVDQYQKTFGYKDINSSAIVTGKPVHNGGINGRHSATGRGVWKAGDLFLKDKEWMDL 271
            |..:.|:||:|:|.|..|:    |.|:|||||:..||..||.:||||||..|.:..|.:      
plant   145 TNAQTMAWILDEYSKFHGH----SPAVVTGKPIDLGGSLGREAATGRGVVFATEALLAE------ 199

  Fly   272 LKWKTGWKDKTVIVQGFGNVGSFAAKYVHEAGAKVIGIKEFDVSLVNKDGIDINDLFEYTEEKKT 336
              :....:..|.::|||||||::|||.:||.|.||:.:.:...::.|.:|||||.|.::.:...:
plant   200 --YGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHKDATGS 262

  Fly   337 IKGYPKAQE-SKEDLLVAETDILMPCATQKVITTDNAKDIKAKLILEGANGPTTPSGEKILLDKG 400
            :..:..... :.::||:.|.|:|:|||...|:..:||.|:|||.|:|.||.||.|..::||..||
plant   263 LNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAGDVKAKFIVEAANHPTDPDADEILSKKG 327

  Fly   401 VLLVPDLYCNAGGVTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSINESLHECPDSQLPNIC 465
            |:::||:|.|||||||||||:::|                                         
plant   328 VIILPDIYANAGGVTVSYFEWVQN----------------------------------------- 351

  Fly   466 PNKKLKRIQQCTTEADIVDSALQTVMESAARGIKEMAHKFELCNDLRRAAYVWSSFKIFQAMESS 530
                   ||....|.:.|:..||..|..|...||.|.|... || ||..|:.....::.:|.:..
plant   352 -------IQGFMWEEEKVNLELQKYMTRAFHNIKTMCHTHS-CN-LRMGAFTLGVNRVARATQLR 407

  Fly   531 G 531
            |
plant   408 G 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bb8NP_651140.1 GdhA 40..532 CDD:440103 162/456 (36%)
GDH2NP_196361.1 PLN02477 1..410 CDD:178095 162/456 (36%)

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