DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bb8 and gdh1

DIOPT Version :9

Sequence 1:NP_651140.1 Gene:bb8 / 42756 FlyBaseID:FBgn0039071 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_588184.1 Gene:gdh1 / 2539147 PomBaseID:SPCC622.12c Length:451 Species:Schizosaccharomyces pombe


Alignment Length:534 Identity:134/534 - (25%)
Similarity:224/534 - (41%) Gaps:123/534 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VETDKDPEFSEMVLYYYHKAAQTMEPALLKEMEKYPHMKPEERQARVTAILNLLGSVSTSVEVNF 99
            :.|..:|||.:.    |.:...::|.:  |..|.:|.:|      ||..|:::...|     :.|
pombe     1 MSTPYEPEFQQA----YKEIVGSIESS--KLFEVHPELK------RVLPIISIPERV-----LEF 48

  Fly   100 PIVRKN--GTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEVKALAAIMTFKCACVNVPYGGSK 162
            .:..::  |...:.:|||........|.|||:|:...||.|.:|.|.....||.|...:|.||.|
pombe    49 RVTWEDDKGNCRVNTGYRVQFNSALGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLPMGGGK 113

  Fly   163 GGICIDPKKYTVDELQTITRRYTMELLKRNMIGPGIDVPAPDVN-TGPREMSWIVDQYQKTFG-Y 225
            ||...|||..:.:|::..::.:..:|.:  .|||..||||.|:. ||     ::|   ...|| |
pombe   114 GGSDFDPKGKSDNEIRRFSQAFMRQLFR--YIGPQTDVPAGDIGVTG-----FVV---MHMFGEY 168

  Fly   226 KDINS--SAIVTGKPVHNGGINGRHSATGRGVWKAGDLFLKDKEWMDLLKWKT----GWKDKTVI 284
            |.:.:  |.:||||.:..||.|.|..|||.||    ..::|     .:::.:|    ..|.|.|.
pombe   169 KRLRNEYSGVVTGKHMLTGGSNIRPEATGYGV----VYYVK-----HMIEHRTKGAETLKGKRVA 224

  Fly   285 VQGFGNVGSFAAKYVHEAGAKVIGIKEFDVSLVNK--DGI---DINDLFEYTEEKKTI------- 337
            :.|.|||..:||....:.||.|..|.:....|:.|  :|:   :|:::....|::.:|       
pombe   225 ISGSGNVAQYAALKCIQEGAIVKSISDSKGVLIAKTAEGLVPEEIHEIMALKEKRASIADSASLC 289

  Fly   338 KGYPKAQESKEDLLVAETDILMPCATQKVITTDNAKDI---KAKLILEGANGPTTPSGEKIL--- 396
            |.:.....::....|.|.||.:|||||..::.:.|..:   ..:.:.||:|..::....::.   
pombe   290 KKHHYIAGARPWTNVGEIDIALPCATQNEVSGEEAAALIKQGCRYVAEGSNMGSSAEAVEVFEKS 354

  Fly   397 --LDKGVLLVPDLYCNAGGVTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSINESLHECPDS 459
              ..:|..|.|....|||||.||..|..:|....::                             
pombe   355 RASGEGCWLAPGKAANAGGVAVSGLEMAQNAQFSTW----------------------------- 390

  Fly   460 QLPNICPNKKLKRIQQCTTEADIVDSALQTVMESAARGIKEMAHKFELCN-------DLRRAAYV 517
                              |.|: ||:.|..:|::......::|.|:  |:       .|...|.:
pombe   391 ------------------THAE-VDAKLAGIMQNIFEQSTDVASKY--CDSGSNNIPSLVDGANI 434

  Fly   518 WSSFKIFQAMESSG 531
            ....|:..||::.|
pombe   435 AGFLKVATAMQAVG 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bb8NP_651140.1 GdhA 72..532 CDD:223411 125/497 (25%)
ELFV_dehydrog_N 95..221 CDD:280903 40/128 (31%)
NAD_bind_1_Glu_DH 242..517 CDD:133445 67/305 (22%)
gdh1NP_588184.1 PRK09414 4..448 CDD:181834 132/529 (25%)
ELFV_dehydrog_N 42..170 CDD:280903 44/142 (31%)
NAD_bind_2_Glu_DH 180..449 CDD:133455 74/328 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 75 1.000 Domainoid score I2482
eggNOG 1 0.900 - - E1_COG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I1551
OMA 1 1.010 - - QHG54967
OrthoFinder 1 1.000 - - FOG0001473
OrthoInspector 1 1.000 - - otm47168
orthoMCL 1 0.900 - - OOG6_100455
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R306
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.760

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