DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bb8 and Glud1

DIOPT Version :9

Sequence 1:NP_651140.1 Gene:bb8 / 42756 FlyBaseID:FBgn0039071 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_032159.1 Gene:Glud1 / 14661 MGIID:95753 Length:558 Species:Mus musculus


Alignment Length:529 Identity:236/529 - (44%)
Similarity:344/529 - (65%) Gaps:22/529 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GIYPLMPRQVLKRSAHQVPEKLKKVETDKDPEFSEMVLYYYHKAAQTMEPALLKEMEKYPHMKPE 75
            |:.|:..|...:.:|          :.:.||.|.:||..::.:.|..:|..|:::::  .....|
Mouse    44 GLTPVARRHYSEAAA----------DREDDPNFFKMVEGFFDRGASIVEDKLVEDLK--TRESEE 96

  Fly    76 ERQARVTAILNLLGSVSTSVEVNFPIVRKNGTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEV 140
            :::.||..||.::...:..:.::|||.|.:|::|:|.|||:.|.:||.|.||||||:.||:..||
Mouse    97 QKRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEV 161

  Fly   141 KALAAIMTFKCACVNVPYGGSKGGICIDPKKYTVDELQTITRRYTMELLKRNMIGPGIDVPAPDV 205
            ||||::||:|||.|:||:||:|.|:.|:||.||.:||:.||||:||||.|:..|||||||||||:
Mouse   162 KALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDM 226

  Fly   206 NTGPREMSWIVDQYQKTFGYKDINSSAIVTGKPVHNGGINGRHSATGRGVWKAGDLFLKDKEWMD 270
            :||.||||||.|.|..|.|:.|||:.|.|||||:..|||:||.|||||||:...:.|:.:..:|.
Mouse   227 STGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMS 291

  Fly   271 LLKWKTGWKDKTVIVQGFGNVGSFAAKYVHEAGAKVIGIKEFDVSLVNKDGIDINDLFEYTEEKK 335
            :|....|:.|||.:||||||||..:.:|:|..|||.:|:.|.|.|:.|.||||..:|.::..:..
Mouse   292 ILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDGIDPKELEDFKLQHG 356

  Fly   336 TIKGYPKAQESKEDLLVAETDILMPCATQKVITTDNAKDIKAKLILEGANGPTTPSGEKILLDKG 400
            :|.|:|||:..:..:|.|:.|||:|.|::|.:|..||..:|||:|.|||||||||..:||.|::.
Mouse   357 SILGFPKAKVYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERN 421

  Fly   401 VLLVPDLYCNAGGVTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSINESL------HECPDS 459
            ::::||||.|||||||||||:|||:||||||::..|...:....|:.|:.|||      |   ..
Mouse   422 IMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKH---GG 483

  Fly   460 QLPNICPNKKLKRIQQCTTEADIVDSALQTVMESAARGIKEMAHKFELCNDLRRAAYVWSSFKIF 524
            .:| :.|..:.:......:|.|||.|.|...||.:||.|...|.|:.|..|||.||||.:..|:|
Mouse   484 TIP-VVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVF 547

  Fly   525 QAMESSGIS 533
            :....:|::
Mouse   548 KVYNEAGVT 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bb8NP_651140.1 GdhA 72..532 CDD:223411 223/465 (48%)
ELFV_dehydrog_N 95..221 CDD:280903 77/125 (62%)
NAD_bind_1_Glu_DH 242..517 CDD:133445 126/280 (45%)
Glud1NP_032159.1 GdhA 104..546 CDD:223411 218/445 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843209
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1271
OMA 1 1.010 - - QHG54967
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001473
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100455
Panther 1 1.100 - - O PTHR11606
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R306
SonicParanoid 1 1.000 - - X1737
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.690

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