DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wam and Ccdc114

DIOPT Version :10

Sequence 1:NP_651139.1 Gene:wam / 42755 FlyBaseID:FBgn0039070 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_650569.1 Gene:Ccdc114 / 42024 FlyBaseID:FBgn0038452 Length:473 Species:Drosophila melanogaster


Alignment Length:474 Identity:120/474 - (25%)
Similarity:238/474 - (50%) Gaps:20/474 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEIKKFDKLAFLESYLLKHKELGKRQREYKKILSSKLKTRKETIIEASFETAIDQLEEEKNDLR 65
            |.:..:.|:||..|...|:.:..| .|.:.:.:|..|.|..|:.      ...|:.|:.|...|:
  Fly     1 MTDQSELDQLATAELQRLQRQHRG-LQLDLRGLLEEKAKRLKKQ------NHMINVLQVEHQKLK 58

  Fly    66 AQIWVASGTTHKKQNNRWLELIRCHVECQENLSQDINSLKTSISNMEKEISRMSKQIYNLNRLTI 130
            .:|....|.||.::|....:.:....|.|.:|.:.:.:.:|::..:|..|.:|.|:|..|.|..:
  Fly    59 EEIKTLEGGTHARKNTNREKHLGTLQEQQADLQRVLQNERTNLWELEGHIRKMEKEIDALRRNEV 123

  Fly   131 PDQQHQAYVMRARKRMTILENSLEVGVRQECG-FTAANADLREQLIRILNHRTFFNDSYTKMVQK 194
            ||..::..:.:.:|.:..|||.|:| |.::|. ....|:.:|:.:..:|..|..|||.:..||.:
  Fly   124 PDNCYKDTICKVQKSVVKLENRLDV-VNKKCSDVLTENSKMRDAINHMLQDRANFNDMWQSMVTQ 187

  Fly   195 LNSEKKYLIDLIEYALNTFDGCIEVYEKIDLLAKREAKERDMRRVEMQGIMRKVAADGDNTAFLN 259
            .|..||:::|||:.:...||...|:..|:.:|..|...::.|...||:.:.|::..|.....|.:
  Fly   188 FNEGKKFIMDLIDQSTLAFDQREELCNKLTVLKDRNENDKVMHIQEMREMQRRLEHDAKLQKFFD 252

  Fly   260 CKSKPRELADLQPKEYKRRDEFRRVHNKKINLYNSVLQKI-LQYTESSNMDEVIDKFQQQESLYY 323
            .|.:.|...:|:.:|..::...:..:.:::..|..:::|| |.|.| .:.|.::.:|::||...:
  Fly   253 IKGQKRLNPELEQRELDKKQSQKETYERQLLEYKEIIEKIKLLYGE-EDADRLVAQFKRQEDENF 316

  Fly   324 SFFNYANEMSYHITMLNNSVNRLFEDIVNLKKDNS----NTLQDQLDQISSLENKVRNKQESNME 384
            :.|||.||:|:.:.:||:|...|.::|...|.:.:    ....:.||.:::.:.::....|   |
  Fly   317 ALFNYVNELSHEVEVLNDSTQELQDEIERQKSEQTEKELKLKTEALDYLNAEKERIEQLAE---E 378

  Fly   385 LHKARENNDARLENLLQGVETVCEMCSIDASPLTKLLGDHTHVNLVNVNRFLKLLETRVQELTAS 449
            ..:.:.....|||.||:|:|.:....:.|.:|:..:|...|.:.:.||..|:.::|.||..:.::
  Fly   379 TRERKRTLSIRLEQLLKGIEDIFRQLACDDAPILNVLSTKTFLTVHNVKLFIGVIERRVNLIISA 443

  Fly   450 VYVMERQEE--GRFDYVVK 466
            :.:.:...:  .|.|.|.|
  Fly   444 INIEDNSNKILARKDRVPK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wamNP_651139.1 None
Ccdc114NP_650569.1 SMC_N <13..384 CDD:481474 95/382 (25%)

Return to query results.
Submit another query.