DRSC/TRiP Functional Genomics Resources

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Protein Alignment wam and Odad1

DIOPT Version :10

Sequence 1:NP_651139.1 Gene:wam / 42755 FlyBaseID:FBgn0039070 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_001119749.1 Gene:Odad1 / 308594 RGDID:1308141 Length:694 Species:Rattus norvegicus


Alignment Length:472 Identity:120/472 - (25%)
Similarity:207/472 - (43%) Gaps:78/472 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KHKELGKRQREYKKILSSKLKTRKETIIEASFETAIDQLEEEKNDLRAQIWVASGTTHKKQNNRW 83
            :.|.:...:|.|.:.:..:::.:.|         .|.|||..:..|:.||.||.....:..:.:.
  Rat    34 QRKVMELERRAYSREVHQRIRKQVE---------EIRQLEMLRAKLQMQINVAQTQVKRLGDKKR 89

  Fly    84 L----ELIRCHVECQ---ENLSQDINSLKTSISNMEKEISRMSKQIYNLNRLTIPDQQHQAYVMR 141
            |    .|::|..:.|   |.|.:...:|:..|.:.|..|...||.|...:  .|.||:     |:
  Rat    90 LADMDHLLKCRAQVQIEIEALQEQNRALEKQIQDWETHILTQSKDISTPD--VILDQK-----MK 147

  Fly   142 ARKRMTILENSLEVGVRQECGF---TAANADLRE--QLIRILNHRTFFNDSYTKMVQKLNSEKKY 201
            .::|:.|||:.|:   |..|.|   ...||.|||  :|:||...|      |..|.:||..|...
  Rat   148 IQRRIRILEDQLD---RVTCHFDIHLVRNAALREELELLRIERGR------YLNMDRKLKKEIHL 203

  Fly   202 LIDLIEYALNT-----FDGCIEVYEKIDLLAKREAKERDMRRVEMQGIMRKVAADGDNTAFLNCK 261
            |.:::. ||:|     :....|...|:.:|.:|..||......|.|.::|:::.......||..|
  Rat   204 LQEMVG-ALSTSSTSAYTAREEAKTKMGMLQERAEKELAQSDTEAQILLRQISHLEQLHRFLKLK 267

  Fly   262 SKPRELADLQP------KEYKRRDE----FRRVHNKKINL-YNSVLQKILQYTESSNMDEVIDKF 315
            :.     |.||      ||.:|..|    .|:...:|:.| |...|.|:.|.|..|:.|.:::|:
  Rat   268 NH-----DRQPDPGVVQKEEQRAWETSEGLRKTSQEKLVLRYEDTLNKLAQLTGESDPDLLVEKY 327

  Fly   316 QQQESLYYSFFNYANEMSYHITMLNNSVNRLFEDIVNLKKDNSNTLQDQLDQISSLENKVRNK-- 378
            .:.|...::.||:.||.:..:..|...:..:.|.:|     :.:..||:    .|||.:.:.|  
  Rat   328 LELEERNFAEFNFINEQNSELYHLQEEIKEMQEALV-----SEHASQDK----QSLEREQQCKVL 383

  Fly   379 QESNMELHKARENNDAR-------LENLLQGVETVCEMCSIDASPLTKLLGDHTHVNLVNVNRFL 436
            |:...::....|..:||       ||.:...::.:.:....|.|.:..|||..|::...::..||
  Rat   384 QQDVEKVCSESERLEARFQVLRVQLEKIKTDIQVLFDKAQCDNSVIKDLLGVKTYMRDRDIGLFL 448

  Fly   437 KLLETR-VQELTASVYV 452
            ..:|.| ||.||...::
  Rat   449 STIEKRLVQLLTVQAFL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wamNP_651139.1 None
Odad1NP_001119749.1 SMC_prok_B 24..>319 CDD:274008 83/315 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..290 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 531..550
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 571..694
Blue background indicates that the domain is not in the aligned region.

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