DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc16 and yphG

DIOPT Version :10

Sequence 1:NP_477397.1 Gene:Cdc16 / 42753 FlyBaseID:FBgn0025781 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_417044.4 Gene:yphG / 947021 ECOCYCID:G7343 Length:1093 Species:Escherichia coli


Alignment Length:292 Identity:62/292 - (21%)
Similarity:106/292 - (36%) Gaps:61/292 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 LKILNELLKVDPFHNTALTIQIACLVENGDFNRLFYVAHKLVDRYPDKAISWYAVGCYYDMIGKS 442
            |....:.|:..|.:...|.:....||.:|..:.......||:..||..|..|:.  .::|  |:|
E. coli   589 LDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRDYPLNATLWWL--NWFD--GRS 649

  Fly   443 DPAR---RYLSKATALDRL--------YGPAWLAYGHSFANENEHEQAMAAYFKATQLMRGCHLP 496
            :.|.   |.|.:...::.|        :|...||  ....|..:.::.:..|.:|:.|.:     
E. coli   650 ESALAQWRGLCQGRDVNALMTAGQLINWGMPTLA--AEMLNALDCQRTLPLYLQASLLPK----- 707

  Fly   497 LLYIGVECG--LTKNLELAEKF--FLQAM-NIAPLDV-----YVLHELGVIKYEYEFFDGAATIF 551
                 .|.|  :.|.:::..:|  |...: .:|.|:.     :..|.|....|....::.|...:
E. coli   708 -----AERGELVAKAIDVFPQFVRFPNTLEEVAALESIEECWFARHLLACFYYNKRSYNKAIAFW 767

  Fly   552 QCTVDIVKQRAKSNNEEISSRWEPLFINLGHSLRKVHKYEEALYNFQYALLLKPQSPTTYTSIGF 616
            |..|::        :.|.:..|..|.|   |:..|.|.||.|......|..|.||..........
E. coli   768 QRCVEM--------SPEFADGWRGLAI---HAWNKQHDYELAARYLDNAYQLAPQDARLLFERDL 821

  Fly   617 IHAL--------LGNLDPAIEAFHKSLALNRD 640
            :..|        |..|:..:|     :||.||
E. coli   822 LDKLSGATPEKRLARLENNLE-----IALKRD 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc16NP_477397.1 ANAPC3 31..112 CDD:463743
BepA <373..456 CDD:443813 19/80 (24%)
TPR 423..>640 CDD:440225 50/245 (20%)
TPR repeat 426..454 CDD:276809 8/30 (27%)
TPR repeat 462..488 CDD:276809 5/25 (20%)
TPR repeat 493..523 CDD:276809 5/34 (15%)
TPR repeat 528..552 CDD:276809 4/28 (14%)
TPR repeat 576..602 CDD:276809 9/25 (36%)
TPR repeat 607..637 CDD:276809 4/37 (11%)
yphGNP_417044.4 DUF5107 40..343 CDD:407262
Spy 422..>605 CDD:443119 3/15 (20%)
TPR repeat 495..523 CDD:276809
TPR repeat 534..564 CDD:276809
LapB 539..842 CDD:442196 57/279 (20%)
TPR repeat 569..597 CDD:276809 1/7 (14%)
TPR repeat 603..631 CDD:276809 6/27 (22%)
TPR repeat 746..772 CDD:276809 5/25 (20%)
LapB 749..>961 CDD:442196 27/116 (23%)
TPR repeat 777..808 CDD:276809 10/33 (30%)
Blue background indicates that the domain is not in the aligned region.

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