DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc16 and CDC16

DIOPT Version :9

Sequence 1:NP_477397.1 Gene:Cdc16 / 42753 FlyBaseID:FBgn0025781 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_012903.1 Gene:CDC16 / 853846 SGDID:S000001505 Length:840 Species:Saccharomyces cerevisiae


Alignment Length:740 Identity:184/740 - (24%)
Similarity:316/740 - (42%) Gaps:167/740 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PGDTENTSTDTTNEHIDL----ALYRQLVKQF--IDMRRYSTALFWAEKVAVLGGLEPRDIYYQA 60
            |..|...:|.||...:|:    |:.|..:.:|  :....|.||.:.|:||..:.. :|.|.::..
Yeast   207 PLTTTTLTTTTTATQLDVSELSAIERLRLWRFDALMQHMYRTAEYIADKVYNISN-DPDDAFWLG 270

  Fly    61 QCMYLLGEYHRAAHTIQHHKLEKNSLPCFNLLLESLYAAKEFTEAANVI--QNVEVEVMTTSLIN 123
            |..|...:|.||...|..:.|:..::.|..||..|....:.|.:|.:||  .|...|..:|:..|
Yeast   271 QVYYNNNQYVRAVELITRNNLDGVNILCRYLLGLSFVKLQRFDDALDVIGEYNPFSEDPSTTAAN 335

  Fly   124 ------------QPVDASSGCYLESNSVFGGEENHRNELLSSIYLMKGKVYEALDNRGMAMDFYV 176
                        ||| ...|..:|                ||:..::||:|.|.:|...|.|.:.
Yeast   336 TMSNNGNNSNTSQPV-TDGGIKME----------------SSLCFLRGKIYFAQNNFNKARDAFR 383

  Fly   177 QALHKSIYCFEALEALVQHEMLMAWEEFELMHHLPLAQQSSEADAKFILKLYESRLKKYYELISA 241
            :|:...|..|||.|.|:...:|...||::|...|...:...  |.:.:..||:..|.||.     
Yeast   384 EAILVDIKNFEAFEMLLSKNLLTPQEEWDLFDSLDFKEFGE--DKEIMKNLYKINLSKYI----- 441

  Fly   242 RNAEEMSPIVNPDILQFIKEFTARVQQSGSSDTQMPKVSAVKVPLTPSQFMSPAQKVLEDLKAPT 306
             |.|:                                                            
Yeast   442 -NTED------------------------------------------------------------ 445

  Fly   307 FSLQTSLSKASSLIDASHRSMFDSSSRRRSRDHDTDTLIPIAECLDRVQRSTDLMAAEAEKCFYD 371
                  ::|::.::...::                     :|:.:|.|:...|:       |:..
Yeast   446 ------ITKSNEILAKDYK---------------------LADNVDVVRSKVDI-------CYTQ 476

  Fly   372 CDYKQCLKILNELLKVDPFHNTALTIQIACLVENGDFNRLFYVAHKLVDRYPDKAISWYAVGCYY 436
            |.:.:||::...:|:.|.|:...|...|.||.|..:.|:||.::|:|.:.:|..||:|::|..||
Yeast   477 CKFNECLELCETVLENDEFNTNILPAYIGCLYELSNKNKLFLLSHRLAETFPKSAITWFSVATYY 541

  Fly   437 DMIGKSDPARRYLSKATALDRLYGPAWLAYGHSFANENEHEQAMAAYFKATQLMRGCHLPLLYIG 501
            ..:.:...|::|.||::.||..:..|||.:.|::|.|.|.:||:.||..|::...|.|||.|::|
Yeast   542 MSLDRISEAQKYYSKSSILDPSFAAAWLGFAHTYALEGEQDQALTAYSTASRFFPGMHLPKLFLG 606

  Fly   502 VECGLTKNLELAEKFFLQAMNIAPLDVYVLHELGVIKYEYEFFDGAATIFQCTVDIVKQRAKSNN 566
            ::.....:|.|||.:|:.|.:|.|.|..||:|:||:.::...|..|....:..:::||....|:.
Yeast   607 MQFMAMNSLNLAESYFVLAYDICPNDPLVLNEMGVMYFKKNEFVKAKKYLKKALEVVKDLDPSSR 671

  Fly   567 EEISSRWEPLFINLGHSLRKVHKYEEALYNFQYALLLKPQSPTTYTSIGFIHALLGNLDPAIEAF 631
            ..||     :.:||||:.||:::.|.|:..|:..|....::...:.|:|:::.....|..||:..
Yeast   672 TTIS-----IQLNLGHTYRKLNENEIAIKCFRCVLEKNDKNSEIHCSLGYLYLKTKKLQKAIDHL 731

  Fly   632 HKSLALNRDCIVTSTILKSCIE-----------DLMDDSATIDEICSAALRDVAKNITANSRR-V 684
            ||||.|..:....:.:||:.:|           .|:|.|    .:.|.|.:|.|   :.|.:| .
Yeast   732 HKSLYLKPNNSSATALLKNALELNVTLSLDASHPLIDKS----NLMSQASKDKA---SLNKKRSS 789

  Fly   685 LNSDKFNGMKLKFDEEEEFANSDSN 709
            |..|..|..|....::|.|   |.|
Yeast   790 LTYDPVNMAKRLRTQKEIF---DQN 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc16NP_477397.1 ANAPC3 31..112 CDD:289650 23/82 (28%)
TPR_11 425..489 CDD:290150 24/63 (38%)
TPR repeat 426..454 CDD:276809 10/27 (37%)
TPR repeat 462..488 CDD:276809 12/25 (48%)
TPR repeat 493..523 CDD:276809 11/29 (38%)
TPR repeat 528..552 CDD:276809 7/23 (30%)
TPR_11 576..638 CDD:290150 19/61 (31%)
TPR repeat 576..602 CDD:276809 9/25 (36%)
TPR repeat 607..637 CDD:276809 9/29 (31%)
CDC16NP_012903.1 ANAPC3 242..322 CDD:403946 23/80 (29%)
TPR repeat 295..322 CDD:276809 8/26 (31%)
TPR repeat 327..386 CDD:276809 17/75 (23%)
PEP_TPR_lipo <364..741 CDD:274350 121/483 (25%)
TPR repeat 530..560 CDD:276809 10/29 (34%)
TPR repeat 565..591 CDD:276809 11/25 (44%)
TPR repeat 598..628 CDD:276809 11/29 (38%)
TPR repeat 633..665 CDD:276809 8/31 (26%)
TPR repeat 678..702 CDD:276809 9/23 (39%)
TPR repeat 707..737 CDD:276809 9/29 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343859
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1173
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2899
Inparanoid 1 1.050 247 1.000 Inparanoid score I666
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56718
OrthoFinder 1 1.000 - - FOG0004793
OrthoInspector 1 1.000 - - oto100189
orthoMCL 1 0.900 - - OOG6_102501
Panther 1 1.100 - - LDO PTHR12558
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R265
SonicParanoid 1 1.000 - - X3945
TreeFam 1 0.960 - -
1413.790

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