DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc16 and cdc16

DIOPT Version :9

Sequence 1:NP_477397.1 Gene:Cdc16 / 42753 FlyBaseID:FBgn0025781 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001032466.1 Gene:cdc16 / 562014 ZFINID:ZDB-GENE-051113-132 Length:616 Species:Danio rerio


Alignment Length:736 Identity:262/736 - (35%)
Similarity:389/736 - (52%) Gaps:156/736 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IDLALYRQLVKQFIDMRRYSTALFWAEKVAVLGGLEPRDIYYQAQCMYLLGEYHRAAHTIQHHKL 81
            ::|...|:.|:.:||.::|.:|||||:|:|.|...:|:|||:.|||:||..:||||:|.::..||
Zfish     1 MNLDRLRKRVRHYIDQQQYQSALFWADKIASLSHEDPQDIYWLAQCLYLTAQYHRASHALRSRKL 65

  Fly    82 EKNSLPCFNLLLESLYAAKEFTEAANVIQNVEVEVMTTSLINQPVDASSGCYLESNSVFGGEENH 146
            :|....|..|.....|||||:.:|.::: ::| |..:..|:::.:...:|    |..:....|..
Zfish    66 DKLYGACQYLAARCHYAAKEYQQALDIL-DME-EAASKKLLDKNLKEENG----SREIVKDWEMS 124

  Fly   147 RNELLSSIYLMKGKVYEALDNRGMAMDFYVQALHKSIYCFEALEALVQHEMLMAWEEFELMHHLP 211
            .:.:.|||.|::||:|:|:|||.:|...|.:||...:|||||.:.|..|.||.|.||.:.:..||
Zfish   125 PSSINSSICLLRGKIYDAMDNRPLATSSYKEALKLDVYCFEAFDLLTSHHMLTAQEEKDFLDSLP 189

  Fly   212 LAQQSSEADAKFILKLYESRLKKYYELISARNAEEMSPIVNPDILQFIKEFTARVQQSGSSDTQM 276
            |:||.:|.:.:.:..|:|::||||         .:.|.:|.|||:.                   
Zfish   190 LSQQCAEEEVELLHFLFENKLKKY---------NKPSEMVVPDIVN------------------- 226

  Fly   277 PKVSAVKVPLTPSQFMSPAQKVLEDLKAPTFSLQTSLSKASSLIDASHRSMFDSSSRRRSRDHDT 341
                                           .||.:|                            
Zfish   227 -------------------------------GLQDNL---------------------------- 232

  Fly   342 DTLIPIAECLDRVQRSTDLMAAEAEKCFYDCDYKQCLKILNELLKVDPFHNTALTIQIACLVENG 406
                             |::.:.||:.:|:||:|.|..:.:.::..||||...|.:.|..|||..
Zfish   233 -----------------DVVVSLAERHYYNCDFKMCYSLTSMVMVKDPFHANCLPVHIGTLVELS 280

  Fly   407 DFNRLFYVAHKLVDRYPDKAISWYAVGCYYDMIG-KSDPARRYLSKATALDRLYGPAWLAYGHSF 470
            ..|.|||::|||||.||...:||:||||||.|:| |::.|||||||||.|:|.|||||:||||||
Zfish   281 KANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLERTYGPAWIAYGHSF 345

  Fly   471 ANENEHEQAMAAYFKATQLMRGCHLPLLYIGVECGLTKNLELAEKFFLQAMNIAPLDVYVLHELG 535
            |.|:||:|||||||.|.|||:|||||:||||:|.|||.|.:|||.||.||::|||.|.:|:||:.
Zfish   346 AVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNPKLAEHFFSQALSIAPEDPFVIHEVA 410

  Fly   536 VIKYEYEFFDGAATIFQCTVDIVKQRAKSNNEEISSRWEPLFINLGHSLRKVHKYEEALYNFQYA 600
            |:.::...:..:..:|   :|.:::.....||....:||||..||||..||:.|||:||...:.|
Zfish   411 VVAFQNGDYKTSEKLF---LDAMEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYEQALEYHRQA 472

  Fly   601 LLLKPQSPTTYTSIGFIHALLGNLDPAIEAFHKSLALNRDCIVTSTILKSCIEDLMDDSATIDEI 665
            |:|.||:.:||::||::|:|.|:.:.||:.||.:|.|.||...:.|:|..|||..:.||   |..
Zfish   473 LVLIPQNASTYSAIGYVHSLKGDFESAIDYFHTALGLKRDDTFSVTMLGHCIEMYISDS---DAY 534

  Fly   666 CSAALRD-VAKNIT-------------ANSRRV--------------LNSDK----FNGMKLKFD 698
            ....::| |.|.:.             .|..|.              .|:||    |....|:.|
Zfish   535 IGTDIKDKVRKTLNTPALMKMLNTSADGNESRAQPVEEVNVCIETPSFNADKQTDAFQRFLLECD 599

  Fly   699 EEEEFANSDSNMVVEMSF-DT 718
            ..|      |:|::|.|. ||
Zfish   600 MHE------SDMMLETSMSDT 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc16NP_477397.1 ANAPC3 31..112 CDD:289650 35/80 (44%)
TPR_11 425..489 CDD:290150 45/64 (70%)
TPR repeat 426..454 CDD:276809 19/28 (68%)
TPR repeat 462..488 CDD:276809 20/25 (80%)
TPR repeat 493..523 CDD:276809 20/29 (69%)
TPR repeat 528..552 CDD:276809 4/23 (17%)
TPR_11 576..638 CDD:290150 29/61 (48%)
TPR repeat 576..602 CDD:276809 13/25 (52%)
TPR repeat 607..637 CDD:276809 12/29 (41%)
cdc16NP_001032466.1 ANAPC3 15..94 CDD:289650 35/79 (44%)
TPR repeat 36..65 CDD:276809 14/28 (50%)
TPR repeat 70..94 CDD:276809 8/24 (33%)
TPR repeat 299..330 CDD:276809 20/30 (67%)
TPR repeat 337..363 CDD:276809 20/25 (80%)
TPR repeat 368..398 CDD:276809 20/29 (69%)
TPR_11 402..477 CDD:290150 27/77 (35%)
TPR repeat 403..431 CDD:276809 6/30 (20%)
TPR_11 448..509 CDD:290150 29/60 (48%)
TPR repeat 448..474 CDD:276809 13/25 (52%)
TPR 449..479 CDD:197478 15/29 (52%)
TPR repeat 479..509 CDD:276809 12/29 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580825
Domainoid 1 1.000 78 1.000 Domainoid score I8716
eggNOG 1 0.900 - - E1_KOG1173
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2899
Inparanoid 1 1.050 476 1.000 Inparanoid score I1445
OMA 1 1.010 - - QHG56718
OrthoDB 1 1.010 - - D269745at33208
OrthoFinder 1 1.000 - - FOG0004793
OrthoInspector 1 1.000 - - oto39104
orthoMCL 1 0.900 - - OOG6_102501
Panther 1 1.100 - - LDO PTHR12558
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R265
SonicParanoid 1 1.000 - - X3945
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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