Sequence 1: | NP_001262870.1 | Gene: | orb / 42752 | FlyBaseID: | FBgn0004882 | Length: | 915 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001015925.1 | Gene: | cpeb3 / 548679 | XenbaseID: | XB-GENE-5716009 | Length: | 632 | Species: | Xenopus tropicalis |
Alignment Length: | 660 | Identity: | 183/660 - (27%) |
---|---|---|---|
Similarity: | 277/660 - (41%) | Gaps: | 173/660 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 218 PLTPSSTHSSASP----GTKSNFDYFQFENVAQSNPLKAFQ------RTNISFDCS--------- 263
Fly 264 --------APLSPSTPTSIYNRSFHS-SPLV----SDSSNSSSGIGLSMDSINMFYNQQQQ---- 311
Fly 312 ------QQQPEQQGYTSLGNSMGSGLG-------LSLANASTRSN--SPESQNSSNSTTEQNLLD 361
Fly 362 MINLLSVNSNK-IPHQQQQQQQQQQQQQQQQQQNQQQLQVQQQHQLQQQFVNLNRNYEQQISANL 425
Fly 426 GSQQHGFEHNGVGVGASSSGNENCFSQYNLENITSVDMELAKLQNLQRINTLKLLHAQAQQMPLI 490
Fly 491 NQLLQSYAGNAIGSVGGSNLGNLMSAGGSSLMTEMAGNVGGIITTNDGHLDRVAKFYKSSAALCD 555
Fly 556 ATCTWSGHLPPRSHRMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEWPGKEQQAA--QPKG 618
Fly 619 YVYIIFESDKQVKALLSACVLQVDDSHCGRNYFFKISSRRIKSKDVEVIPWIIADSNFVRSSSQK 683
Fly 684 LDPTKTVFVGALHGKLTAEGLGNIMDDLFDGVLYAGIDTD-KYKYPIGSGRVTFSNFRSYMKAVS 747
Fly 748 AAFIEIRTTKFTKKVQVDPY-LEDALC-----SICGVQHGPYYCRELSCFRYFCRSCWQWQHSCD 806
Fly 807 IVKNHKPLTR 816 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
orb | NP_001262870.1 | CEBP1_N | <540..570 | CDD:292978 | 4/29 (14%) |
RRM1_CPEB1 | 574..674 | CDD:241167 | 40/101 (40%) | ||
RRM2_CPEB1 | 685..770 | CDD:241169 | 45/86 (52%) | ||
CEBP_ZZ | 762..817 | CDD:292976 | 22/61 (36%) | ||
cpeb3 | NP_001015925.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..89 | 6/17 (35%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 127..212 | 19/90 (21%) | |||
RRM | <371..537 | CDD:223796 | 80/171 (47%) | ||
RRM1_CPEB2_like | 375..466 | CDD:241168 | 38/96 (40%) | ||
RRM2_CPEB2_like | 483..563 | CDD:241170 | 40/79 (51%) | ||
CEBP_ZZ | 558..619 | CDD:292976 | 22/61 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |