Sequence 1: | NP_001262870.1 | Gene: | orb / 42752 | FlyBaseID: | FBgn0004882 | Length: | 915 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017445833.1 | Gene: | Cpeb3 / 309510 | RGDID: | 1564670 | Length: | 779 | Species: | Rattus norvegicus |
Alignment Length: | 859 | Identity: | 216/859 - (25%) |
---|---|---|---|
Similarity: | 325/859 - (37%) | Gaps: | 226/859 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 QKHSISSYLDHHHQQQQQQQHHLQLQQHQQQHSLLERCNDDGLISFINDPITLNDLLGLCGASTA 96
Fly 97 NEVVGTGQTP----STSAPILGAGGGGRA-NGVTAGAATATGVGVGAGGTLPG------------ 144
Fly 145 PGVPSIQGGGGGGVVGQQTNASCNTSAANPSASFGGNGSSSDVNNLLLASAAAAAAAAAG----D 205
Fly 206 GAQLSAN---------AAAYAP---LTPSSTHSSASPGTKSNFDYFQFENVAQSNPLKAFQRTNI 258
Fly 259 SFDCSAPLSPSTPTSIYNRSFHSSPLVSDSSNSSSGIGLSMDSINMFYNQQQQQQ---------- 313
Fly 314 ---QPEQQGYTSLGNSMGSGLGL-SLANASTRSNSPESQN-------------SSNSTTEQNLLD 361
Fly 362 MINLLSVNSNKIPHQQQQQQQQQQQQQQQQQQNQQQLQVQQQHQLQQQFVNLNRNYEQQISANLG 426
Fly 427 SQQHGFEHNGVGVGASSSGNENCFSQYNLEN----ITSVDMELAKLQNLQRINTLKLLHAQAQQM 487
Fly 488 PLINQLLQSYAGNAIGSVGGSNLGNLMSAGGSSLMT-EMAGNVGGIITTNDGHLDRVAKFYKSSA 551
Fly 552 ALCDATCTWSGHLPPRSHRMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEWPGKEQQAA-- 614
Fly 615 QPKGYVYIIFESDKQVKALLSACVLQVDDSHCGRNYFFKISSRRIKSKDVEVIPWIIADSNFVRS 679
Fly 680 SSQKLDPTKTVFVGALHGKLTAEGLGNIMDDLFDGVLYAGIDTD-KYKYPIGSGRVTFSNFRSYM 743
Fly 744 KAVSAAFIEIRTTKFTKKVQVDPY-LEDALC-----SICGVQHGPYYCRELSCFRYFCRSCWQWQ 802
Fly 803 HSCDIVKNHKPLTR 816 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
orb | NP_001262870.1 | CEBP1_N | <540..570 | CDD:292978 | 4/29 (14%) |
RRM1_CPEB1 | 574..674 | CDD:241167 | 40/101 (40%) | ||
RRM2_CPEB1 | 685..770 | CDD:241169 | 45/86 (52%) | ||
CEBP_ZZ | 762..817 | CDD:292976 | 22/61 (36%) | ||
Cpeb3 | XP_017445833.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0129 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |