Protein Alignment orb and cpeb2

DIOPT Version :10

• Sequence 1: NP_524460.2
• Gene: orb / 42752
• FlyBaseID: FBgn0004882
• Length: 915
• Species: Drosophila melanogaster
• Sequence 2: XP_004911287.2
• Gene: cpeb2 / 100492019
• XenbaseID: XB-GENE-961735
• Length: 815
• Species: Xenopus tropicalis
• Alignment Length: 854
• Identity: 221/854 - (25%)
• Similarity: 339/854 - (39%)
• Gaps: 219/854 - (25%)

  Fly   123 GVTAGAATATGVGVGAGGTLPGPGVPSIQGGGGGGVVGQQTNASCNTSAANPSASFGGNGSSSDV 187
            |:...|..::|.| |:||:          |||||.:.|   ..:...||..||.|
 Frog     7 GLLQAANLSSGSG-GSGGS----------GGGGGSLFG---GGAYRGSAQFPSLS---------- 47

  Fly   188 NNLLLASAAAAAAAAAG------DGAQLSANAAAYAPLTPSSTHSSAS----------------P 230
                 |::.:|...:||      |...|..:.|      |.|.||.|:                |
 Frog    48 -----AASGSALFLSAGYQQVMQDELLLGVSCA------PGSKHSIAAKSGPSRASPPALLLQEP 101

  Fly   231 GTKSNF-----DYFQFENVAQSNPL----KAFQRTNI--------SFDCSAPLSPSTPTSIYNRS 278
            ..:.:|     |.|:.|...|...:    .|:||...        ..||.....|.:|:|..:.|
 Frog   102 AKRKDFSPQEGDAFREELKKQPGEMNQQPSAYQRQGSPAAAAAAEELDCPDKNLPGSPSSSSSSS 166

  Fly   279 FHSS------PLVSDSSNSSSGIGLSMDSINMFYNQQQQQQ--------------QPEQQGYTSL 323
            ..||      .::.::..::|...||...:........:.|              .||.....:.
 Frog   167 SSSSSCSAEEAVLGEAHAATSPPALSHHHLPAKGKLPMEAQGGHLPNLLGGPYPGSPELPSTQTP 231

  Fly   324 GNS----MGSGLGLSLANASTRSNSPESQNSSNSTTEQNLLDMINLL------------------ 366
            |.|    .|.|...|:..:|.....|.........|.......:|.|
 Frog   232 GGSPPALPGFGTPWSVQTSSPPPPPPALPQQQQPATPHPAGPNLNALHSPDPDSFYPGIPSSINP 296

  Fly   367 ----SVNSNKIP-------HQQQQQQQQQQQQQQQQQQNQQQLQVQQQHQLQQQFVNLNRNYEQQ 420
                |.:.|..|       ......|....|||||.:::....|:..||.....|:....:|...
 Frog   297 AFFQSFSGNPCPGINVPGFSSPFSAQINIPQQQQQSRRSPVSPQLNPQHHQAAAFLQQRNSYNHH 361

  Fly   421 ISANLGSQQHGFEHNGVGVGASS-------------------------------SGN-------- 446
            ......|...|.:.:|...|:.|                               |||
 Frog   362 QPIVKQSPWSGHQSSGWSTGSMSWGGIHARDHRRTGNMGMPGNMSQISPLKKPYSGNVIAPPKFT 426

  Fly   447 -------------ENCFSQYNLENI---TSVDMELAKLQNLQRINTLK--LLH-AQAQQMPLINQ 492
                         :|.|...|..|.   ..|.|:.:::.:...:::|:  |:. .:|:..||..:
 Frog   427 RSTPSLTPKSWIEDNVFRTDNNSNTLLPLQVRMDRSRMYDSLNMHSLENSLIEIMRAEHDPLKGR 491

  Fly   493 LLQSYAG-NAIGSVGGSNLGNLMSAGGSSLMTEMAGNVGGIITTNDGHLDRVAKFYKSSAALCDA 556
            |...:.| :::..:...:.|.  ..|.|||.....|      ..:|||.|:|       ..|...
 Frog   492 LNYPHPGTDSLLMLNARSYGR--RRGRSSLFPLDDG------LLDDGHNDQV-------GVLNSP 541

  Fly   557 TCTWSGHLPPRSHRMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEWPGKEQQAA--QPKGY 619
            .| :|||  ....|:..:|.|||:||:|.||.|..:...|:.||.:.|:||.|.:..:  .||||
 Frog   542 NC-YSGH--QNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGY 603

  Fly   620 VYIIFESDKQVKALLSACVLQVDDSHCGRNYFFKISSRRIKSKDVEVIPWIIADSNFVRSSSQKL 684
            .:::|:.:..|:||:.||:.:.     |:.|.. :||..||.|.|::.||.::||:||...||.|
 Frog   604 AFLLFQEESSVQALIDACIEEE-----GKLYLC-VSSPTIKDKPVQIRPWNLSDSDFVMDGSQPL 662

  Fly   685 DPTKTVFVGALHGKLTAEGLGNIMDDLFDGVLYAGIDTD-KYKYPIGSGRVTFSNFRSYMKAVSA 748
            ||.||:|||.:...|.|..|..|||.|:.||.||||||| :.|||.|:|||.|||.:||:.|:||
 Frog   663 DPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISA 727

  Fly   749 AFIEIRTTKFTKKVQVDPY-LEDALC-----SICGVQHGPYYCRELSCFRYFCRSCWQWQHSCDI 807
            .|::::.....|:|:|.|| |:|.:|     :.||.:..|::|..::|.:|:|..||...||...
 Frog   728 RFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAG 792

  Fly   808 VKNHKPLTR 816
            .:.||||.:
 Frog   793 REFHKPLVK 801

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
orb	NP_524460.2	RRM1_CPEB1	574..674	CDD:410122	37/101 (37%)
		RRM2_CPEB1	685..768	CDD:410124	44/84 (52%)
		CEBP_ZZ	762..817	CDD:465105	22/61 (36%)
cpeb2	XP_004911287.2	RRM1_CPEB2_like	558..649	CDD:410123	36/96 (38%)
		RRM2_CPEB2_like	666..746	CDD:410125	40/79 (51%)
		CEBP_ZZ	741..802	CDD:465105	22/61 (36%)