Sequence 1: | NP_001262870.1 | Gene: | orb / 42752 | FlyBaseID: | FBgn0004882 | Length: | 915 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002666445.2 | Gene: | cpeb2 / 100330483 | ZFINID: | ZDB-GENE-130530-639 | Length: | 728 | Species: | Danio rerio |
Alignment Length: | 788 | Identity: | 216/788 - (27%) |
---|---|---|---|
Similarity: | 318/788 - (40%) | Gaps: | 211/788 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 160 GQQTNASCNTSAANPSASFGGNG-----SSSDVNNLLLASAAAAAAAAAGDGAQLSANAAAYAPL 219
Fly 220 TPSSTHS--------SASPGTKSNFDYFQFENVAQ-SNPLKAFQRTNISFDCSAPLSPSTPTSIY 275
Fly 276 NRSFHSSPLVSDSSNSSSGIGLSMDSINMFYNQQQQQQQPEQQGYTSLGNSMGSGLGLSLANA-- 338
Fly 339 -------------------STRSNSPESQNSSN------STTEQN-----LLDMIN---LLSVNS 370
Fly 371 NKIPHQQ-----QQQQQQQQQQQQQQQQNQQQLQVQQQHQLQQQFVNLNRNY----------EQQ 420
Fly 421 ISANLGSQQHGFEH---NGVGVGAS-----------------------SSGN--------ENCFS 451
Fly 452 QYNLENITSVDMELAKLQNLQRINTLKLLHA---------QAQQMPLINQLLQSYAGNAIGSVGG 507
Fly 508 SNLGNLMSAG---GSS--------LMTEMAGNVG--GIITTNDGHLDRVAKFYKSSAALCDATCT 559
Fly 560 WSGHLPPRSH--RMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEWPGKEQQAA--QPKGYV 620
Fly 621 YIIFESDKQVKALLSACVLQVDDSHCGRNYFFKISSRRIKSKDVEVIPWIIADSNFVRSSSQKLD 685
Fly 686 PTKTVFVGALHGKLTAEGLGNIMDDLFDGVLYAGIDTD-KYKYPIGSGRVTFSNFRSYMKAVSAA 749
Fly 750 FIEIRTTKFTKKVQVDPY-LEDALC-----SICGVQHGPYYCRELSCFRYFCRSCWQWQHSCDIV 808
Fly 809 KNHKPLTR 816 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
orb | NP_001262870.1 | CEBP1_N | <540..570 | CDD:292978 | 3/31 (10%) |
RRM1_CPEB1 | 574..674 | CDD:241167 | 39/101 (39%) | ||
RRM2_CPEB1 | 685..770 | CDD:241169 | 45/86 (52%) | ||
CEBP_ZZ | 762..817 | CDD:292976 | 23/61 (38%) | ||
cpeb2 | XP_002666445.2 | RRM | <467..633 | CDD:223796 | 79/171 (46%) |
RRM1_CPEB2_like | 471..562 | CDD:241168 | 38/96 (40%) | ||
RRM2_CPEB2_like | 579..659 | CDD:241170 | 40/79 (51%) | ||
CEBP_ZZ | 654..715 | CDD:292976 | 23/61 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |