DRSC/TRiP Functional Genomics Resources

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Protein Alignment wda and AT4G11270

DIOPT Version :10

Sequence 1:NP_651136.1 Gene:wda / 42750 FlyBaseID:FBgn0039067 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_192866.1 Gene:AT4G11270 / 826729 AraportID:AT4G11270 Length:1446 Species:Arabidopsis thaliana


Alignment Length:186 Identity:44/186 - (23%)
Similarity:71/186 - (38%) Gaps:38/186 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   579 GHTQDVECVAFH-----PNG----NYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPD 634
            |||..|.|:|.|     .||    :.:.:||.|.::|:|...||.::.:.......|.|:..||.
plant   526 GHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSPA 590

  Fly   635 ------GKMLAAAGEETKVRIFDLAAGAQLAELKDHSASISSLSWSTHNRHLATAC--------S 685
                  .|...:.|:::.|.:..|...........|....:.:.|.....::  ||        |
plant   591 PTKRPWSKCFLSVGDDSCVALSSLETLRVERMFPGHPNYPTKVVWDGTRGYI--ACLFRSLSRKS 653

  Fly   686 D--GTLRLWDIK-----------KLSPMSDNSSAGSSSSATTNRVLTVNSSCQRLV 728
            |  ..|.:||:|           ....|.|:..||.|..:.:..||..|:|...|:
plant   654 DPIDVLYIWDVKTGARERVLHGAASHSMFDHFCAGISEKSHSGTVLNGNTSVSSLL 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdaNP_651136.1 TAF5_NTD2 104..273 CDD:471824
WD40 <493..695 CDD:441893 33/140 (24%)
WD40 repeat 501..537 CDD:293791
WD40 repeat 542..578 CDD:293791
WD40 repeat 585..619 CDD:293791 12/42 (29%)
WD40 repeat 626..662 CDD:293791 8/41 (20%)
AT4G11270NP_192866.1 WD40 <514..675 CDD:475233 34/150 (23%)
WD40 repeat 532..577 CDD:293791 12/44 (27%)
WD40 repeat 582..624 CDD:293791 8/41 (20%)
Blue background indicates that the domain is not in the aligned region.

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