DRSC/TRiP Functional Genomics Resources

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Protein Alignment wda and AT3G50390

DIOPT Version :10

Sequence 1:NP_651136.1 Gene:wda / 42750 FlyBaseID:FBgn0039067 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_190608.2 Gene:AT3G50390 / 824203 AraportID:AT3G50390 Length:469 Species:Arabidopsis thaliana


Alignment Length:503 Identity:105/503 - (20%)
Similarity:178/503 - (35%) Gaps:169/503 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 DMYDAP----PPTKINGCSTTANESTFNIRFAKEAQDTGDTELDYFMRLVQTLSGYTRLEAAESD 224
            |:||..    .|::  |.|:..::|.::::....|.|                |.|..::.  :.
plant    31 DIYDITYVDISPSE--GSSSPLSKSPWSVQVDPSAVD----------------SPYHSVKV--TT 75

  Fly   225 DTVAHFRSSKYELHTTAVVVNRICAYLQRRGHVLIM----NLLYT---------WLHVHIVENEQ 276
            ||.    ..|...|:..:::..:   ::..||:..:    :||||         |.: |:   |.
plant    76 DTT----KEKSTNHSPNILLGSL---VREEGHIYSLATSGDLLYTGSDSKNIRVWKN-HV---EF 129

  Fly   277 RAFSEDHLLGLTDDLEGE---DGEDDVVSKPAVTLNTRGDIRPSKSLTEKSN-RKRPAEEPNIML 337
            .:|..:..|.....|.|:   .|..|            |.||..|:.:::|| .:|....||:  
plant   130 SSFKSNSGLVKAIVLAGDKIFTGHQD------------GKIRVWKAASKESNVHRRVGTMPNL-- 180

  Fly   338 ETDIKQEVETDESAELSKLQLNIDACLDTLKSATEQILKSQVELPRFLRISERSRGLTSAHLDPS 402
                                      ||.::::   |:.|...  .|.|.:..|..|...|||..
plant   181 --------------------------LDYIRNS---IVPSSYF--NFTRRNRSSAALGFRHLDAI 214

  Fly   403 ECHML--------AGFDNSAVQLWQLNQSYCRGKSFYRRYPQKRCPWELNNCANQEEETDED--- 456
            .|..|        :|..:...::|              |....||...:|        ..||   
plant   215 SCLALSEDKRLLYSGSWDKTFKVW--------------RVSDLRCVESVN--------AHEDAVN 257

  Fly   457 -------------SSDEDVKCSEEERRERNRARHCKYADNSYNEYGGFQLRGHTKGVTDVRFSAH 508
                         |:|..||.   .||| ::|:..|:   .::|    .|......||.:.....
plant   258 AVVSGFDGLVFTGSADGTVKV---WRRE-DQAKDTKH---FFSE----TLLKQDCAVTAIAVDQS 311

  Fly   509 YPLMYSVSKDATMRCW-RAHNLHCAAIYRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEK-- 570
            ..|:|..|.|.|:..| |.:|:....:.:.|...:.||  ...|..:.:||.||..|:|...:  
plant   312 ATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCL--VAAGNLMFSGSADLGIRVWRRPEGG 374

  Fly   571 -EH-ALIIYAGHTQDVECVAFHPNGNYIA--------TGSADHSVRLW 608
             || .|.:..||...|:|:|...:...::        :||.|.||::|
plant   375 GEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYSGSLDRSVKMW 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdaNP_651136.1 TAF5_NTD2 104..273 CDD:471824 23/125 (18%)
WD40 <493..695 CDD:441893 35/129 (27%)
WD40 repeat 501..537 CDD:293791 9/36 (25%)
WD40 repeat 542..578 CDD:293791 12/39 (31%)
WD40 repeat 585..619 CDD:293791 8/32 (25%)
WD40 repeat 626..662 CDD:293791
AT3G50390NP_190608.2 WD40 98..423 CDD:238121 90/409 (22%)
WD40 repeat 101..134 CDD:293791 8/36 (22%)
WD40 repeat 140..196 CDD:293791 17/100 (17%)
WD40 repeat 214..250 CDD:293791 7/49 (14%)
WD40 repeat 257..292 CDD:293791 9/41 (22%)
WD40 repeat 303..340 CDD:293791 10/36 (28%)
WD40 repeat 348..384 CDD:293791 12/37 (32%)
WD40 repeat 390..422 CDD:293791 8/31 (26%)
Blue background indicates that the domain is not in the aligned region.

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