DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wda and AT2G26490

DIOPT Version :10

Sequence 1:NP_651136.1 Gene:wda / 42750 FlyBaseID:FBgn0039067 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_180217.1 Gene:AT2G26490 / 817190 AraportID:AT2G26490 Length:465 Species:Arabidopsis thaliana


Alignment Length:354 Identity:75/354 - (21%)
Similarity:126/354 - (35%) Gaps:101/354 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 LDTLKSATEQILKSQVELPRFLRISERSRGLTSAHLDPSECHML---------AGFDNSAVQLWQ 419
            |.|||    .|.|:.::...::.:.:....|...|.|...|..|         |.:|.: :::|:
plant   175 LPTLK----DIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRT-IKVWR 234

  Fly   420 LNQSYCRGKSFYRRYPQKRCPWELNNCANQEEETDE-----DSSDEDVKCSEEERRERNRARHCK 479
            :..|.|     ....|..      ::..|....|.|     .|:|..||..:.:::.       |
plant   235 IADSKC-----LESIPAH------DDAVNSVVSTTEAIVFSGSADGTVKAWKRDQQG-------K 281

  Fly   480 YADNSYNEYGGFQLRGHTKGVTDVRFSAHYPLMYSVSKDATMRCW-RAHNLHCAAIYRSHNYPIW 543
            |..::..:    .|......||.:..|.:...:|..|.|..:..| |...|:...|.:.|...:.
plant   282 YTKHTLMQ----TLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLAVL 342

  Fly   544 CLDESPVGQYVVTGSKDLSARLWSLEKE-H-ALIIYAGHTQDVECVAFHPNGN---------YIA 597
            ||:.:  |..|.:||.|.:..:|..:.. | .|.:..|||..|:|:|...:..         .:.
plant   343 CLEVA--GSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVY 405

  Fly   598 TGSADHSVRLWCATSGKLMRVFADCRQ-AVTQL-----------AFSPDGKMLAAAGEETKVRIF 650
            :||.|.||::|..:..     |.|..| ::.|.           .|..||...::||        
plant   406 SGSLDKSVKVWGVSES-----FIDMNQMSMMQQQQQQHVISHSEPFMSDGSFSSSAG-------- 457

  Fly   651 DLAAGAQLAELKDHSASISSLSWSTHNRH 679
                ||                 |:|.||
plant   458 ----GA-----------------SSHRRH 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdaNP_651136.1 TAF5_NTD2 104..273 CDD:471824
WD40 <493..695 CDD:441893 49/211 (23%)
WD40 repeat 501..537 CDD:293791 9/36 (25%)
WD40 repeat 542..578 CDD:293791 10/37 (27%)
WD40 repeat 585..619 CDD:293791 8/42 (19%)
WD40 repeat 626..662 CDD:293791 8/46 (17%)
AT2G26490NP_180217.1 WD40 96..416 CDD:238121 59/269 (22%)
WD40 repeat 137..171 CDD:293791
WD40 repeat 210..245 CDD:293791 7/40 (18%)
WD40 repeat 251..288 CDD:293791 9/43 (21%)
WD40 repeat 298..335 CDD:293791 10/36 (28%)
WD40 repeat 341..363 CDD:293791 7/23 (30%)
WD40 repeat 383..416 CDD:293791 8/32 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.