DRSC/TRiP Functional Genomics Resources

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Protein Alignment wda and taf5l

DIOPT Version :10

Sequence 1:NP_651136.1 Gene:wda / 42750 FlyBaseID:FBgn0039067 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_956146.1 Gene:taf5l / 334055 ZFINID:ZDB-GENE-030131-5987 Length:601 Species:Danio rerio


Alignment Length:707 Identity:186/707 - (26%)
Similarity:297/707 - (42%) Gaps:134/707 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KNDLLRCAVGLLLKQKNYVSNERFRRSDFLLLQNKQQFAVNKMLDTDLHGGNSFTFSNVQVITNN 99
            :.:.::.||...||::.|:..:...:. ..|.|..::.|.:..:.|:....|..:.:..|.   :
Zfish     5 RTEQIQYAVTQYLKRRQYIDTDGSMKG-AKLSQTAEEMAASLTVQTESSCANVVSAAPCQA---D 65

  Fly   100 QHTVDQQFGRFSQFVEAQAEPLRLEMKRFYGPMLCHFYLDLLKAREPRGAVELLRKYAHLVAPVD 164
            ....:.||.|...|::....||..|......|:.  .||.|..||                    
Zfish    66 PQQYENQFSRLRSFLQEAEGPLVKEASSVLFPLF--LYLHLHMAR-------------------- 108

  Fly   165 MYDAPPPTKINGCSTTANESTFNIRFAKEAQDTGDTELDYFMRLVQTLSGYTRLEAAESDDTVAH 229
                        |.......:|..||....|...:.:     .:|..|.|...|:...::..:..
Zfish   109 ------------CGLKGALDSFYSRFHSLFQQDPEQK-----AIVDLLRGALTLQDVTTNPKLCA 156

  Fly   230 FRSSKYELHTTAVVVNRICAYLQRRGHVLIMNLLYTWLHVHIVENEQRAFSEDHLLGLTDDLEGE 294
            ....||.:|.|....:.:..|||...:..|..:|...|.|.:...::   ::..|.|        
Zfish   157 LLDHKYVVHLTDQAYSYLLRYLQSEDNSAICWVLTAHLQVEVTAAQR---TDYQLYG-------- 210

  Fly   295 DGEDDVVSKPAVTLNTRGDIRPSKSLTEKSNRKRPAEEPNIMLETDIKQEVETDESAELSKLQLN 359
                       ..:.| |:...|.|.|..|                    |:..|.||..::...
Zfish   211 -----------AGVGT-GNTSSSSSSTWAS--------------------VDGSEGAERLEVPAG 243

  Fly   360 I---DACLDTLKSATEQILKSQVELPR--FLRISERSRGLTSAHLDPSECHMLAGFDNSAVQLWQ 419
            :   :|.|:.|:...:::.:....|..  |.......:.|.:|.:......:.||||||||:||.
Zfish   244 LPQNEAALENLQDCIKRVREGPPSLTTVCFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWS 308

  Fly   420 LNQSYCRGKSFYRRYPQKRCPWELNNCAN--QEEETDEDSSDEDVKCSEEERRERNRARHCKYAD 482
            |     |.:.. :..|.|....::....:  :||..|||:|..::|                   
Zfish   309 L-----RARKL-KAGPHKADVSKIRLACDVLEEEADDEDASGSEIK------------------- 348

  Fly   483 NSYNEYGGFQLRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDE 547
                     .||||:..|....|......:.|.|:|:|:|.|...:.....:||.|.||:|.:|.
Zfish   349 ---------TLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDV 404

  Fly   548 SPVGQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATS 612
            ||...|..|.|.|.:|||||..:.:.|.:||||..||:||.||||.|||||||.|.:||||....
Zfish   405 SPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQ 469

  Fly   613 GKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASISSLSWSTHN 677
            |..:|:|...|..|..|||||:||.||:|||:.:::::|||:|....:|:.|:.:|||||:|..:
Zfish   470 GASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDS 534

  Fly   678 RHLATACSDGTLRLWDIKKL--SPMSDNSSA---GSSSSATTNRVLTVN-SSCQRLV 728
            ..:|:|..|.|:|:|||:..  |..:|..|:   |..:.:|:| :|.|. .:|..|:
Zfish   535 SLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSN-ILNVQFMACNLLL 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdaNP_651136.1 TAF5_NTD2 104..273 CDD:471824 33/168 (20%)
WD40 <493..695 CDD:441893 91/201 (45%)
WD40 repeat 501..537 CDD:293791 8/35 (23%)
WD40 repeat 542..578 CDD:293791 14/35 (40%)
WD40 repeat 585..619 CDD:293791 20/33 (61%)
WD40 repeat 626..662 CDD:293791 17/35 (49%)
taf5lNP_956146.1 TAF5_NTD2 66..200 CDD:176269 33/172 (19%)
WD40 <269..553 CDD:441893 116/317 (37%)
WD40 repeat 357..394 CDD:293791 9/36 (25%)
WD40 repeat 400..436 CDD:293791 15/35 (43%)
WD40 repeat 441..477 CDD:293791 21/35 (60%)
WD40 repeat 484..519 CDD:293791 16/34 (47%)
WD40 repeat 525..572 CDD:293791 18/46 (39%)

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