DRSC/TRiP Functional Genomics Resources

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Protein Alignment wda and LOC3290403

DIOPT Version :10

Sequence 1:NP_651136.1 Gene:wda / 42750 FlyBaseID:FBgn0039067 Length:743 Species:Drosophila melanogaster
Sequence 2:XP_564611.3 Gene:LOC3290403 / 3290403 VectorBaseID:AGAMI1_012072 Length:336 Species:Anopheles gambiae


Alignment Length:324 Identity:74/324 - (22%)
Similarity:146/324 - (45%) Gaps:45/324 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 CPWELNNCANQEEETDEDSSDEDVKCSEEERRERNRARHCKYADNSYNEY------GG------- 490
            |.|.......:..|.:.|.:..|...|:::            |..|..||      ||       
Mosquito    19 CAWGRIKVRPEGAEDENDDNSRDSTASKKD------------ASGSQAEYRDFIVTGGVDDTVKI 71

  Fly   491 ---------FQLR----GHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPI 542
                     |:||    ||:.||..|..|....::.|.|.|:::..|:|...............:
Mosquito    72 WDVLPDRSKFKLRNTFTGHSLGVVSVDVSTSGEVIASSSLDSSLCIWKAETGQLMNQISVGPVDL 136

  Fly   543 WCLDESPVGQYVVTGSKDLSARLWSLEKEHA-LIIYAGHTQDVECVAFHPNGNYIATGSADHSVR 606
            |.:..||..:|:::||.:....|:|:|...| .::...:.:....:|:.|:|.|||:|:.|..:.
Mosquito   137 WTVAFSPCDKYIISGSHEGKISLYSVETGKAEQVLDPQNGKFTLSIAYSPDGKYIASGAIDGIIN 201

  Fly   607 LWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASISSL 671
            ::...:||:.:.......:|..|.||||.:||..|.::..::::|:|....:..|..|::.:.|:
Mosquito   202 IFDVAAGKVAQTLEGHAMSVRSLCFSPDSQMLLTASDDGHMKLYDVAHSDVVGTLSGHASWVLSV 266

  Fly   672 SWSTHNRHLATACSDGTLRLWDIKK---LSPMSDNSSA--GSSSSATTNRVLTVN-SSCQRLVD 729
            |:|...::.|::.||.|:::|::.:   |...::::..  |...|..:..|::|: ..|..:.|
Mosquito   267 SFSGDGKNFASSSSDKTVKIWNVAERQCLHTFTEHADQVWGVRYSPDSANVISVSEDKCINMYD 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdaNP_651136.1 TAF5_NTD2 104..273 CDD:471824
WD40 <493..695 CDD:441893 54/206 (26%)
WD40 repeat 501..537 CDD:293791 7/35 (20%)
WD40 repeat 542..578 CDD:293791 10/36 (28%)
WD40 repeat 585..619 CDD:293791 10/33 (30%)
WD40 repeat 626..662 CDD:293791 11/35 (31%)
LOC3290403XP_564611.3 WD40 <59..324 CDD:441893 62/264 (23%)
WD40 repeat 95..133 CDD:293791 7/37 (19%)
WD40 repeat 136..172 CDD:293791 10/35 (29%)
WD40 repeat 180..215 CDD:293791 10/34 (29%)
WD40 repeat 221..257 CDD:293791 11/35 (31%)
WD40 repeat 263..299 CDD:293791 9/35 (26%)
WD40 repeat 305..329 CDD:293791 5/23 (22%)
Blue background indicates that the domain is not in the aligned region.

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