DRSC/TRiP Functional Genomics Resources

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Protein Alignment wda and taf51

DIOPT Version :10

Sequence 1:NP_651136.1 Gene:wda / 42750 FlyBaseID:FBgn0039067 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_596254.1 Gene:taf51 / 2539882 PomBaseID:SPBC15D4.14 Length:642 Species:Schizosaccharomyces pombe


Alignment Length:782 Identity:173/782 - (22%)
Similarity:301/782 - (38%) Gaps:211/782 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KSSASSKKTSSKNDLLRCAVGLLLKQKNYVSNE---RFRRSDFLLLQNKQQFAVNKMLDTDLHGG 85
            :||.||..::|  ||.:..:..|.| |.|...|   |...|....:..:||         |.|.|
pombe     3 QSSYSSGNSTS--DLNKIVLDYLFK-KGYSRTEAMLRLEISSVGAIPEEQQ---------DWHIG 55

  Fly    86 NSFTFSNVQVITNNQHTVDQQFGRFSQFVEAQAEPLRLEMKRFYGPMLCHFYLDLLKAREPRGAV 150
            .|.|:..|.::..:             :::...:..:.::::...|:..|.|||||:..:|..|:
pombe    56 ASETYVQVYILLRD-------------WIDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAI 107

  Fly   151 ELLRKY--AHLVAPVDMYDAPPPTKINGCSTTANESTFNIRFAKEAQDTGDTELDYFMRLVQTLS 213
            .....:  .|.|             ::|         ::||...:.:...|.|            
pombe   108 YFFESFRIEHEV-------------LHG---------YDIRALAQLKIASDVE------------ 138

  Fly   214 GYTRLEAAESDDTVAHFRSSKYELHTTAVVVNRICAYL---QRRGHVLIMNLLYTWLHVHI---- 271
               .:|.|:.      :|.:||.::.|....:.:..:|   :..|..:|:.||..::.:.|    
pombe   139 ---EIEIAQL------YRKNKYRINFTRSTFDLLVQFLFENEVNGSGIIIRLLNQYIDIKITMPQ 194

  Fly   272 -----------------VENEQ----------------------------RAFSEDHLLGLTDDL 291
                             .:|||                            |..||:.:..|.:.|
pombe   195 VEGKEDPNVQAVYEMDEAKNEQTIISEQEGIPGHSEQLLDYNKQSIQLGLRPLSEEVVTTLKNLL 259

  Fly   292 EGED----GEDDVVSKPAVTLNTRGDIRPSKSLTEKSNRKRPAEEPNIMLETDIKQEVETDESAE 352
            |.:|    |.::.::|         .:.|:|:|.|..     .|:.|::.|:.:  |..:|....
pombe   260 EVKDKDVEGRNEALNK---------ILHPAKNLVELL-----TEKENLINESTL--ESPSDPPLP 308

  Fly   353 LSKLQLNIDACLDTLKSATEQIL--KSQVELPRFLRISERSRGLTSAHLDPSECHMLA-GFDNSA 414
            .:|:: :||..:..|:|....::  |:..:...|:.....:....:......:..|.| |..:|:
pombe   309 PTKMK-DIDYFVSLLESEQNSLILGKNATDPSVFMYTMHNTLSAVNCAAFSDDASMFALGCADSS 372

  Fly   415 VQLWQLNQSYCRGKSFYRRYPQKRCPWELNNCANQEEETDEDSSDEDVKCSEEERRERNRARHCK 479
            :.|:                                  :..::..:.:..|:.|..:::      
pombe   373 IHLY----------------------------------SSTNNGPQPLVGSQNEPLQKS------ 397

  Fly   480 YADNSYNEYGGFQLRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWC 544
                        .|.|||:.|..|..|.....:.|.|:|...|.|..........|..||.|||.
pombe   398 ------------SLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWD 450

  Fly   545 LDESPVGQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWC 609
            :..||.|.|..|.|.|.:||||.:|....|.::.||..||:||:||||..|:||||:||:.|:|.
pombe   451 VQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWD 515

  Fly   610 ATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASISSLSWS 674
            ..:|..:|||......|:.|..|.||..||:|.|...::::||.:..|......||:.:.|||:|
pombe   516 VRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFS 580

  Fly   675 THNRHLATACSDGTLRLWDIKKLSPMSDNSSAGSSSSATTNRVLTVNSSCQRLVDVFYGTSKTLY 739
            ..|:.|.:..:|..:..||:...:.:||    |..|....| ..|.|:..|.|     ..::..|
pombe   581 YDNKILVSGGADTDVNFWDLTYRNNLSD----GEQSPLLFN-FKTKNTIIQNL-----SFTRRNY 635

  Fly   740 CI 741
            |:
pombe   636 CL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdaNP_651136.1 TAF5_NTD2 104..273 CDD:471824 28/194 (14%)
WD40 <493..695 CDD:441893 77/201 (38%)
WD40 repeat 501..537 CDD:293791 8/35 (23%)
WD40 repeat 542..578 CDD:293791 15/35 (43%)
WD40 repeat 585..619 CDD:293791 17/33 (52%)
WD40 repeat 626..662 CDD:293791 12/35 (34%)
taf51NP_596254.1 LisH 14..38 CDD:128913 8/24 (33%)
TFIID_NTD2 58..186 CDD:461330 29/183 (16%)
WD40 <350..601 CDD:441893 84/302 (28%)
WD40 repeat 354..401 CDD:293791 8/98 (8%)
WD40 repeat 407..443 CDD:293791 8/35 (23%)
WD40 repeat 448..484 CDD:293791 15/35 (43%)
WD40 repeat 491..526 CDD:293791 18/34 (53%)
WD40 repeat 532..568 CDD:293791 12/35 (34%)
WD40 repeat 574..600 CDD:293791 8/25 (32%)

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