DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wda and taf5

DIOPT Version :9

Sequence 1:NP_651136.1 Gene:wda / 42750 FlyBaseID:FBgn0039067 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_587902.1 Gene:taf5 / 2539353 PomBaseID:SPCC5E4.03c Length:643 Species:Schizosaccharomyces pombe


Alignment Length:724 Identity:156/724 - (21%)
Similarity:274/724 - (37%) Gaps:168/724 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NYVSNERFRRSDFLLLQNKQQFAVNKMLDTDLHGGNSFTFSNVQVITNNQHTVDQQFGRFSQFVE 115
            :|::.:.:.|::             .||..:..|........::.|..........:.....:|:
pombe    18 DYLAKKGYSRTE-------------AMLRLEASGSGVSVEEKLKSIEETPDAYTHTYTILRDWVD 69

  Fly   116 AQAEPLRLEMKRFYGPMLCHFYLDLLKAREPRGAVELLRKYAHLVAPVDMYDAPPPTKINGCSTT 180
            :..|..:.|:.|...|:..|.||:||..                    |.|:|            
pombe    70 SSLELYKAELHRILFPIFVHSYLNLLSQ--------------------DHYEA------------ 102

  Fly   181 ANESTFNIRFAKEAQDTGDTELDYFMRLVQTLSGYTRLEAAESDDTVAHFRSSKYELHTTAVVVN 245
              ...|...|..:..|..|.:       |:.|...:.......|.|...:|.:||:||.:.:..:
pombe   103 --AKQFYELFKDDHTDLHDFD-------VKNLKSLSLPSHVAEDRTAQQYRQNKYQLHFSRITFD 158

  Fly   246 RICAYL---QRRGHVLIMNLLYTWLHVHIVENEQRAFSEDHLLGLTDDLEGEDGEDDVVSKPAVT 307
            .:..:|   ...|..:|:.|:...:.:|||...........::...:.:.|:..|          
pombe   159 LLLHFLFENVSNGGSIIIKLINQHIDIHIVPGRPTVLENAKVINEQEGITGQSFE---------- 213

  Fly   308 LNTRGD--IRPSKSLTEKSNRKRPAE-EPNIMLETDIKQE---VETDESAELSKL---------- 356
               |||  ::|.|.      ::.|.: |...::|.|:::|   .:.|.:.:..||          
pombe   214 ---RGDAQLQPVKL------QQMPMDKEMEKIVEMDLEEEDMMHQNDPNNQSPKLLKEFRKLHEP 269

  Fly   357 -----------------QLNIDACLDTLKSATEQI-LKSQVELPR--FLRISERSRGLTSAHLDP 401
                             .::|.:.::.:|..:::: |..:..||.  .......:..:..|...|
pombe   270 NAEDAPSRDYIPLPPHKGVDILSEVEAVKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCAEFSP 334

  Fly   402 SECHMLAGFDNSAVQLWQLNQSYCRGKSFYRRYPQKRCPWELNNCANQEEETDEDSSDEDVKCSE 466
            ....:..||..|.::||.:            :..:|..|          :.|..:.||       
pombe   335 DSTMIACGFQESYIRLWSI------------KADKKSLP----------KSTSVEDSD------- 370

  Fly   467 EERRERNRARHCKYADNSYNEYGGFQLRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHC 531
                                  |..:|..|:..|....||.....:.|.|:||:.|.|.......
pombe   371 ----------------------GSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTA 413

  Fly   532 AAIYRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYI 596
            ...|:.|..|:|.:...|.|.|..|.|.|.:|:|||.:..:.|.::|||..||:||.||||..|:
pombe   414 LVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYV 478

  Fly   597 ATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAEL 661
            .|||:|.:.|||....|..:|||....|.||.:|.:|||..:|:|..|..:.::|:..|.::..:
pombe   479 LTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTM 543

  Fly   662 KDHSASISSLSWSTHNRHLATACSDGTLRLWDIKKLSPMSDNSSAGSSSSATTNRVLTVNSSCQR 726
            :.|..:|.|||:|..:..|.:..||.|:|.||:.|     .|.:...|||.|.:.|...::....
pombe   544 RGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFK-----TNYNNPVSSSLTGSVVTPFSAKTST 603

  Fly   727 LVDVFYGTS 735
            ..:|.:.||
pombe   604 FNEVNWSTS 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdaNP_651136.1 TAF5_NTD2 104..273 CDD:298747 32/171 (19%)
WD40 324..>700 CDD:225201 101/409 (25%)
WD40 491..700 CDD:238121 75/208 (36%)
WD40 repeat 501..537 CDD:293791 9/35 (26%)
WD40 repeat 542..578 CDD:293791 12/35 (34%)
WD40 repeat 585..619 CDD:293791 16/33 (48%)
WD40 repeat 626..662 CDD:293791 11/35 (31%)
taf5NP_587902.1 LisH 10..36 CDD:285685 4/30 (13%)
TFIID_NTD2 54..177 CDD:282363 29/163 (18%)
WD40 <316..588 CDD:225201 90/327 (28%)
WD40 repeat 329..377 CDD:293791 14/98 (14%)
WD40 <332..575 CDD:238121 84/293 (29%)
WD40 repeat 383..419 CDD:293791 9/35 (26%)
WD40 repeat 424..460 CDD:293791 12/35 (34%)
WD40 repeat 467..502 CDD:293791 17/34 (50%)
WD40 repeat 508..544 CDD:293791 11/35 (31%)
WD40 repeat 550..590 CDD:293791 17/44 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19879
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.970

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