DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wda and qui-1

DIOPT Version :9

Sequence 1:NP_651136.1 Gene:wda / 42750 FlyBaseID:FBgn0039067 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_502613.2 Gene:qui-1 / 178326 WormBaseID:WBGene00004265 Length:1592 Species:Caenorhabditis elegans


Alignment Length:746 Identity:149/746 - (19%)
Similarity:239/746 - (32%) Gaps:220/746 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 MLCHFYL-DLLKAREPRGAVEL----------------LRKYAHLVAPVDMYDAPPPTKINGCST 179
            :|.||.| .:||:.|     ||                |.|:.||::.:.......|..::...|
 Worm   434 VLEHFKLGGILKSLE-----ELVQKADKPVCIFIDDVHLLKFGHLLSQIGRRTETAPDNLSLFMT 493

  Fly   180 TANESTFNIRFA----------KEAQDTG---------DTELDYFMRLVQTLSGYTRLEAAESDD 225
            ::|.:..|..||          .|.:..|         |.:|..     :.:|....|.||:...
 Worm   494 SSNVAPVNAVFAVTQTVNVDVISENEVVGMVQKMAEKVDKKLTN-----EQISAIRPLMAAKDGI 553

  Fly   226 TVAHF-------------------RSSKYELHTTAVVVNRICAYLQRRGHVLIMNLLYTWLHVHI 271
            .:|..                   |.::.|.....:.|.....::....|.|      |.|.:|.
 Worm   554 LIAKSFTHEILFNGNSSMKGGMDGRMTRIEKEFGKLAVGNAVKFIAASSHGL------TRLEIHD 612

  Fly   272 VENEQRAFSEDHLLGLTDDLEGEDGEDD----VVSKPAVT--------------------LNTRG 312
            ..:..|...|:..:.:...|...||..:    ::.|..:.                    |.:..
 Worm   613 AISADREVLEEMNMSIVYSLLTLDGIIEALGPILRKVIIDDRQIIGIAHSGLISWLRNRYLTSSQ 677

  Fly   313 DIRPSK-SLTEK------SNRKRPAEEPNIMLETDIKQEVETDE-SAELSKLQLNIDAC-----L 364
            |||.:. .|::.      .|.:.|..|   :......|.::.|. |....:|:|....|     |
 Worm   678 DIRSAHLQLSDLFADLLIDNEQSPRHE---IAYQSFSQGIKRDNGSPNFRRLRLLWYHCLHSGNL 739

  Fly   365 DTLKS----------------------------ATE------QILKSQVELPRFLRISERSRGLT 395
            |.||.                            ||:      |::..||.:|..:.::..|..|.
 Worm   740 DRLKELSLCHFEYVDYVTRYFGISHLLSLYEECATQILHHDLQVISEQVLVPALVTMARDSEQLA 804

  Fly   396 SAHLDPSEC--HMLAGFDNSAV---QLWQLNQSYCRGKSFYRRYP-------------QKRC--- 439
            :..:.....  |..:.|.||.|   ..|         ...|.|.|             .|.|   
 Worm   805 AEVIGRLRFTRHENSHFLNSLVDQAMSW---------VDLYNRQPLLVPLTCWISPPATKVCRSF 860

  Fly   440 ---PWELNNCA------NQEEETDEDSSDEDVKCSEEERRERNRARHCKYADNSYNE--YGGFQL 493
               .|:..|..      :|......:.||..|                .||.:..:|  .|.|  
 Worm   861 TLKDWKPGNTVLTLSANHQYILISGNQSDPGV----------------IYAYHIASEQLIGTF-- 907

  Fly   494 RGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQYVVTGS 558
            :|||..||.:..|....|..|.|.|.|:..|.............|...:.|...:...||::|.|
 Worm   908 KGHTAAVTCLCSSNDSSLFVSTSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQYLITAS 972

  Fly   559 KDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATSGKLMRVFADCR 623
            .|.||::..||....:..:..||..|..:....|..::.|||.|..|::|..|:||.:.......
 Worm   973 ADSSAKMIKLETGEVMRSFNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLM 1037

  Fly   624 QAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASISSLSWSTHNRHLATA----- 683
            ..|:.||.:.:...:..|.|:..:::|....|.:|.||..|...::||..:..:..|..|     
 Worm  1038 APVSTLAITSNDAFVVVACEDETLKVFSTVGGQELHELMGHEGKVNSLVCAQDDCQLFAATKSKV 1102

  Fly   684 -CSD----------GTLRLWDIKKLSPMSDN 703
             |.|          .|.:.:.|..|...|||
 Worm  1103 FCYDIHNGQMIDVLDTAQPFPICSLKISSDN 1133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdaNP_651136.1 TAF5_NTD2 104..273 CDD:298747 36/195 (18%)
WD40 324..>700 CDD:225201 99/463 (21%)
WD40 491..700 CDD:238121 57/224 (25%)
WD40 repeat 501..537 CDD:293791 8/35 (23%)
WD40 repeat 542..578 CDD:293791 10/35 (29%)
WD40 repeat 585..619 CDD:293791 10/33 (30%)
WD40 repeat 626..662 CDD:293791 9/35 (26%)
qui-1NP_502613.2 WD40 repeat 870..909 CDD:293791 9/56 (16%)
WD40 903..1192 CDD:238121 61/233 (26%)
WD40 repeat 914..950 CDD:293791 9/35 (26%)
WD40 repeat 957..992 CDD:293791 10/34 (29%)
WD40 repeat 998..1034 CDD:293791 11/35 (31%)
WD40 repeat 1040..1077 CDD:293791 10/36 (28%)
WD40 repeat 1082..1105 CDD:293791 4/22 (18%)
WD40 repeat 1124..1158 CDD:293791 5/10 (50%)
WD40 1157..1447 CDD:238121
WD40 repeat 1165..1191 CDD:293791
WD40 repeat 1211..1247 CDD:293791
WD40 repeat 1252..1291 CDD:293791
WD40 repeat 1296..1331 CDD:293791
WD40 repeat 1338..1375 CDD:293791
WD40 repeat 1381..1415 CDD:293791
WD40 repeat 1422..1446 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.