DRSC/TRiP Functional Genomics Resources

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Protein Alignment EloA and tceb-3

DIOPT Version :10

Sequence 1:NP_732846.1 Gene:EloA / 42749 FlyBaseID:FBgn0039066 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_496355.1 Gene:tceb-3 / 174683 WormBaseID:WBGene00010990 Length:434 Species:Caenorhabditis elegans


Alignment Length:548 Identity:127/548 - (23%)
Similarity:196/548 - (35%) Gaps:177/548 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 DLNTSKHKSKHAKS----TKHERSSSSRSHSKSRSD----SDKKHKSSRHDKSKDRDKDREGQKE 179
            |||.|....|.|.:    .::|.|.....::|...|    ..|:.|....|   |.|.:....|:
 Worm    31 DLNVSPEVFKSADTYQCVKRYESSPELAKYAKRVRDKLLGGRKREKGGGED---DADIEHTALKK 92

  Fly   180 AKEHKEKKSNGEHKSKDSSKSSSSHKSSKSESHKSEHTKSKHEKDKTSHSELK-EVKDKSSKHKS 243
            |   |:::.|.:.:..::.||..|.::|.:.....:::|.|..|......|.| |..|...:..|
 Worm    93 A---KKEEVNLDEEFAEAMKSGVSAQASSAPRATVDYSKYKVVKRVEVKVEPKPEPVDVHEQQAS 154

  Fly   244 SSSKSSKRSHSPPRHEEESQKAKIPKVKSKSEEDSADGFDSSMGANFDDVLGLLNIPISSKKSSS 308
            |||.|.:|.|         ||...|.|                                      
 Worm   155 SSSMSYQREH---------QKDYAPVV-------------------------------------- 172

  Fly   309 NSKSKFVAKPTAAPSSSALSAPTTAGSSKEALSTSSRPTSKKPELLASTAKLEPLDPNIALELPT 373
                     ||..||          |..|:|:     |.||                    .|..
 Worm   173 ---------PTCKPS----------GQPKKAI-----PQSK--------------------SLHA 193

  Fly   374 ISNNYKPMPLNQTVMDVVFNQGGSHKAQASRYFNESEALAQGISSKTMRTKIYSGVRTGQILQVP 438
            ..|.:||                                      :..|.|:::|.|......|.
 Worm   194 DENMFKP--------------------------------------RKERQKVFAGRRKRVGEGVS 220

  Fly   439 SLFDLCTRVLQKNIDALEYTGGVPFEVLRPVLERATPQQLLNFEEYNPYLMDDSDVLWQQHVQRH 503
            :|..||..||..:||.:::.|.|||::|:|||:.|:..||.:..:.||.|::|:|.::.:.|.|.
 Worm   221 TLVSLCQTVLMSHIDMIDHVGIVPFDLLKPVLDHASTDQLRHILDVNPMLVEDADEMFHEMVSRE 285

  Fly   504 CRSQRREEME--TWREMFLRCQEEKDR----KLSILAESIKASQKISEAPVRKTQLAFVDSMVKP 562
            .......|..  |||||:.|..|:|.:    ||.:|...|..|.. :::..|:|.:  :|.....
 Worm   286 FPKYANREKSGWTWREMYDRLVEKKQKKENDKLEMLTSRIGKSNS-AQSQGRQTMV--IDMAHTR 347

  Fly   563 PRSVQRKQEQYGTKGKLIATPAARVAALSSVTPNAAKVGDARLRVLAAARDTAQVGAGPARS--- 624
            .||.........::.|:.|||:|  ..||....|....|.|:||.:     |.:.|..|:.|   
 Worm   348 VRSKSFFNTVKDSQVKMSATPSA--LQLSQARKNVKIEGKAQLRTI-----TPRGGGVPSTSRSR 405

  Fly   625 --------------KKAPLMAKTLQFMR 638
                          |.||||||..:.::
 Worm   406 SNNNNNMNNGLVVKKTAPLMAKCKKMLK 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EloANP_732846.1 Med26 30..79 CDD:462573
Elongin_A 455..552 CDD:462026 33/102 (32%)
tceb-3NP_496355.1 Elongin_A 237..337 CDD:462026 32/100 (32%)
Blue background indicates that the domain is not in the aligned region.

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