DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad60 and Sumo3

DIOPT Version :9

Sequence 1:NP_001262867.1 Gene:Rad60 / 42748 FlyBaseID:FBgn0039065 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001019466.1 Gene:Sumo3 / 499417 RGDID:1561022 Length:110 Species:Rattus norvegicus


Alignment Length:93 Identity:22/93 - (23%)
Similarity:36/93 - (38%) Gaps:14/93 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 DNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVGPEDTPHSIG 313
            :||:..::|| ...|.:..:|:::|.....|.|....|.|:....|........:...|||..:.
  Rat    13 ENDHINLKVA-GQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLE 76

  Fly   314 LKS------FHTLTGH-------PTKSH 328
            ::.      |...||.       ||.||
  Rat    77 MEDEDTIDVFQQQTGGTASRASVPTPSH 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad60NP_001262867.1 UBQ <392..422 CDD:294102
Sumo3NP_001019466.1 Ubl_SUMO2_3_4 16..87 CDD:340532 13/71 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..110 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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