DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad60 and sumo3a

DIOPT Version :9

Sequence 1:NP_001262867.1 Gene:Rad60 / 42748 FlyBaseID:FBgn0039065 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_998289.1 Gene:sumo3a / 406398 ZFINID:ZDB-GENE-040426-2133 Length:94 Species:Danio rerio


Alignment Length:115 Identity:25/115 - (21%)
Similarity:45/115 - (39%) Gaps:32/115 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 EDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNPEALCRKPKKFQVKVQADKWKHPLVIPMKK 370
            ||.|.. |:|:            .|:::..|:.....::.    :|::|              :.
Zfish     3 EDKPKE-GVKT------------ENDHINLKVAGQDGSVV----QFKIK--------------RH 36

  Fly   371 TDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420
            |...|::...| |......|.|:..|||..::..|||...:||..:.||:
Zfish    37 TPLSKLMKAYC-ERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDV 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad60NP_001262867.1 UBQ <392..422 CDD:294102 11/29 (38%)
sumo3aNP_998289.1 Ubl_SUMO2_3_4 16..87 CDD:340532 19/89 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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