DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad60 and Nfatc2ip

DIOPT Version :9

Sequence 1:NP_001262867.1 Gene:Rad60 / 42748 FlyBaseID:FBgn0039065 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_035030.2 Gene:Nfatc2ip / 18020 MGIID:1329015 Length:412 Species:Mus musculus


Alignment Length:447 Identity:87/447 - (19%)
Similarity:163/447 - (36%) Gaps:98/447 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ARKRIPEIALPKNPYNLGNDSFSKEVDYDFIEDLPKKSTKTGKR-KNPAATRKNPPKSQDDASPP 75
            ||.|.|...  ::|..|..|:    |..|.:.|..::..:.... :.|.|....|.|.:.|:...
Mouse    24 ARGRCPRAR--QSPARLIPDT----VLVDLVSDSDEEVLEVADPVEVPVARLPAPAKPEQDSDSD 82

  Fly    76 KQ--AEHKAVEPEEDMRTERS--LSPVSLLILEMEKKNGQQSDVEKHAKENDVGPV-ARRTRSSL 135
            .:  ||..|..|...:|..|.  |.|                      .|..|.|| :.:.:|||
Mouse    83 SEGAAEGPAGAPRTLVRRRRRRLLDP----------------------GEAPVVPVYSGKVQSSL 125

  Fly   136 N------------------RSEMAPPPVSPTVE------VPTQTKPKKRGQKKRTSLTTTTSNSA 176
            |                  .:::.....||:.:      .|.:.|.:|:.:|:...:........
Mouse   126 NLIPDNSSLLKLCPSEPEDEADLTNSGSSPSEDDALPSGSPWRKKLRKKCEKEEKKMEEFPDQDI 190

  Fly   177 SMEVSLPSIVGQNNEHISRRWTLAEVAARSKVVDSIDLVSAVAPRVEGFVNLDSEDEGE--KEAP 239
            | .:..||...::.:|......|.||..|.:     ||.|.::|:......|.|.|:..  .|.|
Mouse   191 S-PLPQPSSRNKSRKHTEALQKLREVNKRLQ-----DLRSCLSPKQHQSPALQSTDDEVVLVEGP 249

  Fly   240 PVVEEENIFDNDNPTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITVDMYYNFVG 304
            .:.:...:|     |:::...  .::....:|..:..:::...:|:..|:..|.|.:....:.:.
Mouse   250 VLPQSSRLF-----TLKIRCR--ADLVRLPVRMSEPLQNVVDHMANHLGVSPNRILLLFGESELS 307

  Fly   305 PEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKID-----YNPEALCRKPKKFQVKVQADKWKHPL 364
            |..||.::.|                 .||..||     .:.|| ....::.:::||. |.||.:
Mouse   308 PTATPSTLKL-----------------GVADIIDCVVLASSSEA-TETSQELRLRVQG-KEKHQM 353

  Fly   365 V-IPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420
            : |.:......|::.....|.:......:..||||..|...:.|.:..:|..::|::
Mouse   354 LEISLSPDSPLKVLMSHYEEAMGLSGHKLSFFFDGTKLSGKELPADLGLESGDLIEV 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad60NP_001262867.1 UBQ <392..422 CDD:294102 8/29 (28%)
Nfatc2ipNP_035030.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 5/15 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..115 15/78 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..206 9/70 (13%)
UBQ 258..327 CDD:214563 15/92 (16%)
UBQ 341..410 CDD:294102 16/69 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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