DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4467 and APM1

DIOPT Version :10

Sequence 1:NP_001036747.1 Gene:CG4467 / 42747 FlyBaseID:FBgn0039064 Length:1125 Species:Drosophila melanogaster
Sequence 2:NP_195035.2 Gene:APM1 / 829446 AraportID:AT4G33090 Length:879 Species:Arabidopsis thaliana


Alignment Length:1033 Identity:235/1033 - (22%)
Similarity:387/1033 - (37%) Gaps:232/1033 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 GEPFPWLEKMLPTSVRPLRYMVTIHPNLTTLDVKGQVTIDLHVEKETNFIVLHIQDLNVTEKAI- 191
            |||      .||....|.||.:.::|:|......|.|.|||.:..:|.||||:..||:|.:.:: 
plant     6 GEP------RLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVNDASVS 64

  Fly   192 VTPGPKGYALKIVKVLEFPPRQQLYIEVKERLKKKSNYTLNLRWYSKLNPEPEGFYVDQYESSNG 256
            .||.....||...||:.|...:.|.:|..|.|..... .|.|.:...||.:.:|||...|| .||
plant    65 FTPPSSSKALAAPKVVLFEEDEILVLEFGEILPHGVG-VLKLGFNGVLNDKMKGFYRSTYE-HNG 127

  Fly   257 VERLLAATVFRPNGARRAFPCFDEPHVRAPFRISVFRDRFHIGLSNSIVHTTEDVGFYMGTGLLR 321
            .::.:|.|.|.|..|||.|||:|||..:|.|:|                                
plant   128 EKKNMAVTQFEPADARRCFPCWDEPACKATFKI-------------------------------- 160

  Fly   322 DDFIETPPLPADAVAWVVSDFQRESLQPSAAYIPTTPAPPGSGVGGKKSAQLNNYTQLKGKNPPV 386
                 |..:|.|.||                                                 :
plant   161 -----TLEVPTDLVA-------------------------------------------------L 171

  Fly   387 RNITALTHSLNVNL-------TPRQNLTVVQPTTTTAWPVNLNGNGKPSNLTSLSQSTGSSIKRA 444
            .|:..:...:|.||       :|      :..|...|..|.|        ...:...|...||  
plant   172 SNMPIMEEKVNGNLKIVSYQESP------IMSTYLVAIVVGL--------FDYVEDHTSDGIK-- 220

  Fly   445 PSYTFYAPRDLLIRSSFILHTSRDVLEYLQTWLDISYPLTKVDFVALPSLDRNMISSLGLVTLK- 508
              ...|.......:..|.||.....|:..:.:..:.|||.|:|.:|:|......:.:.||||.: 
plant   221 --VRVYCQVGKADQGKFALHVGAKTLDLFKEYFAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRE 283

  Fly   509 TSFLTDPSSITSEQYQFSALRIAEAMVRQFFGGITSRKVLKDVWLWEGL---IQYLGIHALAPLQ 570
            |:.|.|.....:...|..|..:|..:..|:||.:.:.:....:||.||.   :.||...:|.|..
plant   284 TALLYDEQHSAASNKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEW 348

  Fly   571 ETWPLREMYLLKMATAALDIDAIQGWDSIMNGTSHDGNNEEFF----VQKTAAIFSMLHTAIGED 631
            :.|    ...|..:|..|.:|.::....|....:|....:|.|    .:|.|::..||.:.:|.:
plant   349 KIW----TQFLDESTEGLRLDGLEESHPIEVEVNHAAEIDEIFDAISYRKGASVIRMLQSYLGAE 409

  Fly   632 RFRGCLGSFLKVNRFRTAEPTDLWTICTKKANGSKNIKDMMTLWTHQPGFPLLTVTKMGNSISIS 696
            .|:..|.:::|.:.:..|:..|||  ...:|...:.:..:|:.||.|.|:|:::.......:.:.
plant   410 VFQKSLAAYIKNHAYSNAKTEDLW--AALEAGSGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELE 472

  Fly   697 QRPFRPAEFLAIHDDSYDGNNYNKTTLNATDMPSTVATTTQGSKHKVAPHMKWIFPVT-----YV 756
            |..|                                  .:.||..:    .:||.|||     |.
plant   473 QSRF----------------------------------LSSGSPGE----GQWIVPVTLCCGSYE 499

  Fly   757 TDIN----------NVSETLWMQNVDVTFNVPENVKWIKVNAIQNGYYRVVYNDDNWASLIEELA 811
            ...|          ::.|.|.....|.:..:.....|||:|..|.|:|||.|:|...|.|  ..|
plant   500 KRKNFLLESKSGAYDLKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGL--RNA 562

  Fly   812 ANPNRFTSEDRLGMLSDAFTLCHANLLPCEITMNMIQYLPSETHYGPMA--LALRHLEKWRRILK 874
            ......||.||.|:|.|:|.|..|........:.:......|..|..::  :|:.:     :::|
plant   563 TESQSLTSIDRYGILDDSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAISY-----KVVK 622

  Fly   875 Y-----SECFLMLSEFIKMKISTVMEKVGWS-DDGDV-ATRLLRPEVLLASVLWEDIDSITKAKN 932
            .     .|....:..|..........|:||. ..|:. ...:||.|||.|..::...:::.:|..
plant   623 IGADANQELMSGIKHFFIGVFQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVR 687

  Fly   933 MLNQYLYYNGT-AIPPNLREVVYTG-------SILSGEYIYWQHCWERFVNLQRTSETFVERMQL 989
            ..:.:|....| .:||::|...|..       |..||        :|..:.:.|.::...|:.::
plant   688 RFDAFLADRNTPLLPPDIRRAAYVAVMQRANKSDKSG--------YESLLRVYRETDLSQEKTRI 744

  Fly   990 LRALGRTKDAWLQNRLLSHVTMLPTEEV--VQVLKAIAGTP-TGGAMACRFLQAKWFELEKRLGP 1051
            |.:|....|..:...:|:.|.   ::||  ...|..::|.. .|..:|.::||.||..:....|.
plant   745 LGSLASCPDPTIVQDVLNFVL---SDEVRNQDALYGLSGVSWEGREVAWKWLQEKWEYIGNTWGS 806

  Fly  1052 GTISFAKVISAITQYGATKFDYDELKSLVHRFGRGHGMSV---LNMTLSSVASNVEWV 1106
            |.: ..:.|||:....|:   :::.|.:...|......|:   |..::..|..|..||
plant   807 GFL-ITRFISAVVSPFAS---FEKAKEVEEFFATRSKPSMARTLKQSIERVHINANWV 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4467NP_001036747.1 GluZincin 145..677 CDD:472708 129/547 (24%)
ERAP1_C 783..1078 CDD:463368 74/314 (24%)
APM1NP_195035.2 M1_APN-Q_like 18..453 CDD:341064 129/546 (24%)
ERAP1_C 536..855 CDD:463368 79/340 (23%)

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