DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4467 and Rnpep

DIOPT Version :10

Sequence 1:NP_001036747.1 Gene:CG4467 / 42747 FlyBaseID:FBgn0039064 Length:1125 Species:Drosophila melanogaster
Sequence 2:NP_112359.2 Gene:Rnpep / 81761 RGDID:621137 Length:650 Species:Rattus norvegicus


Alignment Length:602 Identity:111/602 - (18%)
Similarity:192/602 - (31%) Gaps:196/602 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 FIVLHIQ-DLNVTEKAIVTPGPKGYALKIVKVLEFPPRQQLYIEVKERLKKKSNYTLNLRWYSKL 239
            |.:||:. ||. .|.....|||....|                        ....||.||...  
  Rat    34 FEILHLHLDLR-AEFGPPGPGPGSRGL------------------------NGKATLELRCLL-- 71

  Fly   240 NPEPEGFYVDQYESSNGVERLLAATVFR--PNGARRAFPCFDEPHVRAPFRISVFRDRFHIGLSN 302
               |||....:.:|.:.:| ::|||:.|  |...::    ..||   .||....|.   |.|.:.
  Rat    72 ---PEGASELRLDSHSCLE-VMAATLLRGQPGDQQQ----LTEP---VPFHTQPFS---HYGQAL 122

  Fly   303 SIVHTTE---------DVGFYMGTGLLRDDFIETPPLPADAVAWVVSDFQRESLQPSAAYIPTTP 358
            .:|....         ::.:.:|.|              ..|.|:                    
  Rat   123 CVVFPKPCCAAERFRLELTYRVGEG--------------PGVCWL-------------------- 153

  Fly   359 APPGSGVGGKKSAQLNNYTQLKG----------KNPPVRNITALTHSLNVNLTPRQNLTVVQPTT 413
            ||  ....|||...:  |||.:.          ..|.|:    .|:|..|.:.  ...|.|...:
  Rat   154 AP--EQTAGKKKPFV--YTQGQAVLNRAFFPCFDTPAVK----CTYSALVEVP--DGFTAVMSAS 208

  Fly   414 TTAWPVNLNGNGK---------PSNLTSLSQSTGSSIKRAPSYTFYAPRDLLIRSSFILHTSRD- 468
            |  |  ...|..|         ||.|.:|:....:|.:       ..||..:.....::..::: 
  Rat   209 T--W--ERRGPNKFFFQMNQPIPSYLIALAIGDLASAE-------VGPRSRVWAEPCLIEAAKEE 262

  Fly   469 ----VLEYLQTWLDISYPLT--KVDFVALPSLDRNMISSLGLVTLKTSFLTDPSSITSEQYQFSA 527
                :.|:|.|...:..|..  :.|.:.:|.    .....|:.....:|:| |..:..::     
  Rat   263 YNGVIEEFLATGEKLFGPYVWGRYDLLFMPP----SFPFGGMENPCLTFVT-PCLLAGDR----- 317

  Fly   528 LRIAEAMVRQ----FFGGITSRKVLKDVWLWEGLIQYLGIHALAPLQETWPLREMYLLKMATAAL 588
             .:|:.::.:    :||.:.:.....:.||.||...|             ..|.:..:....|..
  Rat   318 -SLADVIIHEISHSWFGNLVTNANWGEFWLNEGFTMY-------------AQRRISTILFGAAYT 368

  Fly   589 DIDA------------IQGWDSIMN--------GTSHDGNNEEFFVQKTAAIFSMLHTAIG-EDR 632
            .::|            :.|.::.:|        |...|....|...:|.....|.|...:| :::
  Rat   369 CLEAATGRALLRQHMDVSGEENPLNKLRVKIEPGVDPDDTYNETPYEKGYCFVSYLAHLVGDQEQ 433

  Fly   633 FRGCLGSFLKVNRFRTAEPTDLWTICTK-----KANGSKNIKDM-MTLWTHQPGF-PLLTVTKMG 690
            |...|.:::...:|::....|......:     |..|..:|... ...|.:.||: |.|.....|
  Rat   434 FDKFLKAYVDEFKFQSILAEDFLEFYLEYFPELKKKGVDSIPGFEFNRWLNTPGWPPYLPDLSPG 498

  Fly   691 NSISISQRPFRPAEFLA 707
            :|:      .:|||.||
  Rat   499 DSL------MKPAEELA 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4467NP_001036747.1 GluZincin 145..677 CDD:472708 100/569 (18%)
ERAP1_C 783..1078 CDD:463368
RnpepNP_112359.2 M1_LTA4H 24..484 CDD:341062 100/569 (18%)
Leuk-A4-hydro_C 530..645 CDD:462686
Blue background indicates that the domain is not in the aligned region.

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