DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4467 and Lta4h

DIOPT Version :10

Sequence 1:NP_001036747.1 Gene:CG4467 / 42747 FlyBaseID:FBgn0039064 Length:1125 Species:Drosophila melanogaster
Sequence 2:NP_032543.2 Gene:Lta4h / 16993 MGIID:96836 Length:611 Species:Mus musculus


Alignment Length:702 Identity:115/702 - (16%)
Similarity:212/702 - (30%) Gaps:264/702 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 TLDVKGQVTIDLHVEKETNFIVLHIQDLNVTEKAIVTPGPKGYALKIVKVLEFPPRQQLYIEVKE 221
            |||.|     ||.:||    :|::.|::..|...  :.|.||..::|...:.....|::.||:..
Mouse    54 TLDTK-----DLTIEK----VVINGQEVKYTLGE--SQGYKGSPMEISLPIALSKNQEIVIEISF 107

  Fly   222 RLKKKSNYTLNLRWYSKLNPEPEGFYVDQYESSNGVERLLAATVFRPNGARRAFPCFDEPHVRAP 286
            ....||:   .|:|   |.|          |.::|.:.....:..:....|...||.|.|.|:..
Mouse   108 ETSPKSS---ALQW---LTP----------EQTSGKQHPYLFSQCQAIHCRAILPCQDTPSVKLT 156

  Fly   287 FRISVFRDRFHIGLSNSIVHTTEDVGFYMGTGLLRDD--------------FIETPPLPADAVAW 337
            :...|...:..:.|.::|                ||.              |.:..|:|...:|.
Mouse   157 YTAEVSVPKELVALMSAI----------------RDGEAPDPEDPSRKIYRFNQRVPIPCYLIAL 205

  Fly   338 VVSDFQRESLQPSAAYIPTTPAPPGSGVGGKKSAQLNNYTQLKGKNPPVRNITALTHSLNVNLTP 402
            |                          ||..:|.|:...|.:..:...|..              
Mouse   206 V--------------------------VGALESRQIGPRTLVWSEKEQVEK-------------- 230

  Fly   403 RQNLTVVQPTTTTAWPVNLNGNGKPSNLTSLSQSTGSSIKRAPSYTFYAPRDLLIRSSFILHTSR 467
                             :.|...:..::..:::..|...       .:...|||:          
Mouse   231 -----------------SANEFSETESMLKIAEDLGGPY-------VWGQYDLLV---------- 261

  Fly   468 DVLEYLQTWLDISYPLTKVDFVALPSLDRNMISSLGLVTLKTSFLTDPSSITSEQYQFSALRIAE 532
                     |..|:|...::...|                  :|:| |:.:..::...:.  ||.
Mouse   262 ---------LPPSFPYGGMENPCL------------------TFVT-PTLLAGDKSLSNV--IAH 296

  Fly   533 AMVRQFFGGITSRKVLKDVWLWEGLIQYLGIHALAPLQETWPLREMYLLKMATAALDIDAIQGWD 597
            .:...:.|.:.:.|.....||.||...||..|....|             .........|:.||.
Mouse   297 EISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRL-------------FGEKFRHFHALGGWG 348

  Fly   598 SIMNGTSHDGNNEEF--------------------FVQKTAAIFSMLHTAIGEDRFRGCLGSFLK 642
            .:.|.....|.:..|                    :.:..|.:|.:.....|.:.|.|.|.:::|
Mouse   349 ELQNTIKTFGESHPFTKLVVDLKDVDPDVAYSSIPYEKGFALLFYLEQLLGGPEVFLGFLKAYVK 413

  Fly   643 VNRFRTAEPTDLWTICTKKANGSKNIKDMMTL--------WTHQPGFPLLTVTKMGNSISISQRP 699
            ...:::. .||.|     |:....:.||.:.|        |.:.||.|                |
Mouse   414 KFSYQSV-TTDDW-----KSFLYSHFKDKVDLLNQVDWNTWLYAPGLP----------------P 456

  Fly   700 FRPAEFLAIHDDSYDGNNYNKTTLNA-------------TDMPS-TVATTTQGSKHKVAPHMKWI 750
            .:|              ||:.|..||             .|:.| ::|.....|.|::...:..:
Mouse   457 VKP--------------NYDVTLTNACIALSQRWVTAKEEDLSSFSIADLKDLSSHQLNEFLAQV 507

  Fly   751 -----FPVTYVTDINNVSETLWMQNVDVTFNVPENVKWIKVNAIQNGYYRVV 797
                 .|:.::..:..|.....:.|.::.|      :|::: .||:.:...:
Mouse   508 LQKAPLPLGHIKRMQEVYNFNAINNSEIRF------RWLRL-CIQSKWEEAI 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4467NP_001036747.1 GluZincin 145..677 CDD:472708 93/561 (17%)
ERAP1_C 783..1078 CDD:463368 3/15 (20%)
Lta4hNP_032543.2 leuko_A4_hydro 6..608 CDD:274120 115/702 (16%)

Return to query results.
Submit another query.