DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzo and rdcA

DIOPT Version :10

Sequence 1:NP_732840.1 Gene:fzo / 42745 FlyBaseID:FBgn0011596 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_418533.1 Gene:rdcA / 948620 ECOCYCID:EG11210 Length:742 Species:Escherichia coli


Alignment Length:735 Identity:126/735 - (17%)
Similarity:254/735 - (34%) Gaps:256/735 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LSRDRMKVAFFGRTSNGKSAVINALLHEKILPSA-----------------------MGHTTSCF 123
            :||..|.:|..|....|||..|||::..::||:.                       ..|.....
E. coli    65 ISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPID 129

  Fly   124 CQVQ--------ANGSNETEHVKVEQEDEHM-------------------------ELSALSQLA 155
            |.:|        .:..:.|:.::::::...:                         .|:.|.:||
E. coli   130 CLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLA 194

  Fly   156 SA-------HSPGALKPSTLLQVNMAKNRCSILDY--DVVLMDTPGVDVTAQ--LDDCLDSYCMD 209
            .|       .:..|::...:::|... :...:..|  .:.|:||||.:...|  |...|:.....
E. coli   195 KALDVDFPFSAYAAIEHIPVIEVEFV-HLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLAR 258

  Fly   210 ADVFILVLNAESTVSRVERQFFKDVASKLSRPNLFILNNRWDKASSLEPEMEQ---KVKDQHMER 271
            |...:.||:.....|..:.:..:.:.:......|::|.|::|:......:.:|   .:....|:.
E. coli   259 ASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTLMKG 323

  Fly   272 CVNLLVDELGVYSTAQEAWERIYHVSAL------EALH--IRNGQITNPSGQTQQRY-------- 320
            |:           |.|:    |:.||::      .|.:  ..||::..|.   |||:        
E. coli   324 CI-----------TPQQ----IFPVSSMWGYLANRARYELANNGKLPPPE---QQRWVEDFAHAA 370

  Fly   321 ------------QEFLRFEND-------------------FSNCLAVSALKTKFGPHLLSAQKIL 354
                        .|.:|...|                   ::|. ::.||::       :|.|:|
E. coli   371 LGRRWRHADLADLEHIRHAADQLWEDSLFAQPIQALLHAAYANA-SLYALRS-------AAHKLL 427

  Fly   355 NQLKS------------TLICPFIEKVSRLIDENKE----RRANLNAEIEDWLIL--------MQ 395
            |..:.            .:.|..:.:....|:|:.:    .:|.::.||:..:.|        ::
E. coli   428 NYAQQAREYLDFRAHGLNVACEQLRQNIHQIEESLQLLQLNQAQVSGEIKHEIELALTSANHFLR 492

  Fly   396 EDREALQY----CFEELTEMTQRV-GRCVLNDQIKTLIPSSVLSFSQPFHPEFPAQIGQYQRSLC 455
            :.::||:.    .|::.:|....: .||      :||:.::..:.|:    :|..:..:.:.:||
E. coli   493 QQQDALKVQLAALFQDDSEPLSEIRTRC------ETLLQTAQNTISR----DFTLRFAELESTLC 547

  Fly   456 AHLDKLLEDRVLQCLSIPLQRKILDIEKEIGLPIAENSCDWQLIYGLDCQSYMSDFQPDLRFRFS 520
                     |||..:..|       ||:::.:.::|                 |.|:|...|...
E. coli   548 ---------RVLTDVIRP-------IEQQVKMELSE-----------------SGFRPGFHFPVF 579

  Fly   521 LG----------FTALWHRLEGNLPLHASPFRIQKLQNGHKKCSPLPPLVNGNHWQMLESLVKSK 575
            .|          |:.:..|.|..   .....|:..::....:....|....||.....|::..| 
E. coli   580 HGVVPHFNTRQLFSEVISRQEAT---DEQSTRLGVVRETFSRWLNQPDWGRGNEKSPTETVDYS- 640

  Fly   576 GSLGTVLLSAMA--IRSFNWPIVLILGGLVG-------SFYIYEYAAWTTAAQERSFKS------ 625
                 ||..|::  :..:...:..:|...|.       :.:..|:|:..|..|.|..:|      
E. coli   641 -----VLQRALSAEVDLYCQQMAKVLAEQVDESVTAGMNTFFAEFASCLTELQTRLRESLALRQQ 700

  Fly   626 --QYARLLQQRLRSDVQQTV 643
              ...||:||:|    ||||
E. coli   701 NESVVRLMQQQL----QQTV 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzoNP_732840.1 DLP_2 87..334 CDD:206739 58/363 (16%)
Fzo_mitofusin 566..716 CDD:461432 22/95 (23%)
rdcANP_418533.1 PRK09866 1..741 CDD:182123 126/735 (17%)

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