DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cnc and Nfe2l2

DIOPT Version :9

Sequence 1:NP_001262864.1 Gene:cnc / 42743 FlyBaseID:FBgn0262975 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_006234458.1 Gene:Nfe2l2 / 83619 RGDID:620360 Length:604 Species:Rattus norvegicus


Alignment Length:986 Identity:205/986 - (20%)
Similarity:325/986 - (32%) Gaps:433/986 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 EEESEIAEVLYKQDVDLGFSLDQEAIINASYASGNSAATNVKSKPEDETKSSDPSISESSGFKDT 406
            :::.::.::|::||:|||.|.:               ..:...:.:|.                 
  Rat    14 QQDMDLIDILWRQDIDLGVSRE---------------VFDFSQRQKDY----------------- 46

  Fly   407 DVNAENEASAASVDDIEKLKAL-----EELQQDKDKNNENQLEDITNEWNGIPFTIDNETGEYIR 466
                          ::||.|.|     |:||::::|....||:            :|.||||::.
  Rat    47 --------------ELEKQKKLEKERQEQLQKEQEKAFFAQLQ------------LDEETGEFLP 85

  Fly   467 L-PLDELLNDVLKLSEFPLQDDLSNDPVASTSQAAAAFNENQAQRIVSETGEDLLSGEGISSKQN 530
            : |...:..|.        ...:|...||...:..|.:.|: ..::::|| ...:....:||...
  Rat    86 IQPAQHIQTDT--------SGSVSYSQVAHIPKQDALYFED-CMQLLAET-FPFVDDHEVSSPTF 140

  Fly   531 RNEAKNKDNDPEKADGDSFSVSD-FEELQNSVGSPLFDLDEDAKKELDEMLQSAVPSYHHPHPHH 594
            ::.|.   :.|...:...|:..| .:.|.:|:.:.:.|| ...:::::::.|...          
  Rat   141 QSLAL---DIPSHVESSVFTTPDQAQSLDSSLETAMTDL-SSIQQDMEQVWQELF---------- 191

  Fly   595 GHPHAHPHSHHHASMHHAHAHHAAAAAAAHQRAVQQANYGGGVGVGVGVGVGVGSGTGSAFQRQP 659
                                                                             
  Rat   192 ----------------------------------------------------------------- 191

  Fly   660 AAGGFHHGHHQGRMPRLNRSVSMERLQDFATYFSPIPSMVGGVSDMSPYPHHY---PGYSYQASP 721
                        .:|.| :.::.|..|...|  :.:||....:::|....|.|   |....:.  
  Rat   192 ------------SIPEL-QCLNTENKQQAET--TTVPSPEATLTEMDSNYHFYSSIPSLEKEV-- 239

  Fly   722 SNGAPGTPGQHGQYGSGANATLQPPPPPPPPHHAAMLHHPNAALGDICPTGQPHYGHNLGSAVTS 786
                                                         |.|   .||:.|....:.:|
  Rat   240 ---------------------------------------------DSC---SPHFLHGFEDSFSS 256

  Fly   787 SMHLTNSSHEADGAAAAAAAYKVEHDLMYYGNTSSDINQTDGFINSIFTDEDLHLMDMNESFCRM 851
            .:...::|.                      ..|.|.|.|   :|:.|.||..            
  Rat   257 ILSTDDASQ----------------------LNSLDSNPT---LNTDFGDEFY------------ 284

  Fly   852 VDNSTSNNSSVLGLPSSGHVSNGSGSSAQLGAGNPHGNQANGASGGVGSMSGSAVGAGATGMTAD 916
                    |:.|..||.|                             |||..|   |..:...::
  Rat   285 --------SAFLAEPSGG-----------------------------GSMPSS---AAISQSLSE 309

  Fly   917 LLASGGAGAQGGADRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHQGKYGGPYDFSYNN 981
            ||.       |..:..|.|...|.:...:|.....:|.:.|                   .|.| 
  Rat   310 LLG-------GPIEGCDLSLCKAFNQKHTEGTVEFNDSDSG-------------------ISLN- 347

  Fly   982 NSRLSTATRQPPVAQKKHQLYGKRDPHKQTPSALPPTAPPAAATAVQSQSIKYEYDAGYASSGMA 1046
                ::.:|..|....:..:||  ||            ||                 |::.|.|.
  Rat   348 ----TSPSRASPEHSVESSIYG--DP------------PP-----------------GFSDSEME 377

  Fly  1047 SGGISEPGAMGPALSKDYHHHQPYGMGASGSAFSGDYTVRP-SPRTSQDLV----QLNHT--YSL 1104
            ... |.||::           :..|..|..:..||| ||:| ||.......    |..:|  ..:
  Rat   378 ELD-SAPGSV-----------KQNGPKAQPTHSSGD-TVQPLSPAQGHSAAVHESQCENTTKKEV 429

  Fly  1105 PQGSGSLPRPQARDKKPLVATKTASKGASAGNSSSVGGNSSNLEEEHLTRDEKRARSLNIPISVP 1169
            |...|....|..:||                       :||.| |.||||||.||::|:||..|.
  Rat   430 PVSPGHQKVPFTKDK-----------------------HSSRL-EAHLTRDELRAKALHIPFPVE 470

  Fly  1170 DIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNAVVKRK 1234
            .|||||:|:|||.:||...:|.||:|||||||||||||||||||||||:.|:.||          
  Rat   471 KIINLPVDDFNEMMSKEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLENIVELE---------- 525

  Fly  1235 TQLNQDRDHLESERKR--------------ISNKFAMLHRHVFQYLRDPEGNPCSPADYSLQQAA 1285
                ||..||:.||::              :..|.:.|:..||..|||.:|.|.||::|||||..
  Rat   526 ----QDLGHLKDEREKLLREKGENDRNLHLLKRKLSTLYLEVFSMLRDEDGKPYSPSEYSLQQTR 586

  Fly  1286 DGSVYLLPREK 1296
            ||:|:|:|:.|
  Rat   587 DGNVFLVPKSK 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cncNP_001262864.1 bZIP_CNC 1192..1259 CDD:269846 35/80 (44%)
coiled coil 1193..1255 CDD:269846 33/75 (44%)
Nfe2l2XP_006234458.1 bZIP_NFE2-like 493..560 CDD:269868 35/80 (44%)
coiled coil 494..556 CDD:269868 33/75 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 98 1.000 Domainoid score I6996
eggNOG 1 0.900 - - E1_KOG3863
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1095280at2759
OrthoFinder 1 1.000 - - FOG0002254
OrthoInspector 1 1.000 - - otm45530
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24411
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.880

Return to query results.
Submit another query.