Protein Alignment cnc and sknr-1

DIOPT Version :10

• Sequence 1: NP_001262864.1
• Gene: cnc / 42743
• FlyBaseID: FBgn0262975
• Length: 1430
• Species: Drosophila melanogaster
• Sequence 2: NP_001303755.1
• Gene: sknr-1 / 189139
• WormBaseID: WBGene00020961
• Length: 385
• Species: Caenorhabditis elegans
• Alignment Length: 271
• Identity: 64/271 - (23%)
• Similarity: 92/271 - (33%)
• Gaps: 83/271 - (30%)

  Fly   976 DFSYNNNSRLSTATRQPPVAQKKHQLYGKRDPHKQTPSALPPT------------------APPA 1022
            ||.  |.|.:||...||      ...:...|  .||.....||                  ...:
 Worm   163 DFC--NQSSISTIAAQP------QSFFHSAD--SQTVEQWLPTDVVLNEVFPTSNYEYIGMQNDS 217

  Fly  1023 AATAVQSQSIKYEYDA-GYASS----GMASGGISEPGAMGP-------ALSKDYHHHQPYGMGAS 1075
            ....|.::.|.|.|.: |...:    |...||..:...|.|       ..|.|.:|.|.:.....
 Worm   218 LQAVVSNEQIDYAYQSIGQTQTPLNIGSTIGGGPQQTQMSPESVTVTATASFDLYHSQKHSFSER 282

  Fly  1076 GSAFSGDYTVRPSPRTSQDLVQLNHTYSLPQGSGSLPRPQARDKKPLVATKTASKGASAGNSSSV 1140
            .:..|.     .|||:||..:::.....|..|.    |.:.|.
 Worm   283 TTDSSS-----TSPRSSQSSIKIARVVPLTGGQ----RKRGRQ---------------------- 316

  Fly  1141 GGNSSNLEEEHLTRDEKRARSLNIPISVPDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKN 1205
                        :.||:.|....:|:|...|..:.:.|..:.|....|:|.|:.|||.|||||||
 Worm   317 ------------SIDEQLASDNGLPVSAFQISEMSLSEVKQVLKDESLNEYQIQLIRKIRRRGKN 369

  Fly  1206 KVAAQNCRKRK 1216
            |.||:.||:|:
 Worm   370 KAAARTCRERR 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cnc	NP_001262864.1	bZIP_CNC	1192..1259	CDD:269846	17/25 (68%)
		coiled coil	1193..1255	CDD:269846	16/24 (67%)
sknr-1	NP_001303755.1	bZIP	356..>380	CDD:473870	16/23 (70%)